Naegleria gruberi: NAEGRDRAFT_45272
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Entry
NAEGRDRAFT_45272 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_45272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_45272
Spliceosome [BR:
ngr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
NAEGRDRAFT_45272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
AP5B1_C
Dynactin_p22
Motif
Other DBs
NCBI-GeneID:
8863665
NCBI-ProteinID:
XP_002683293
JGI:
Naegr1_45272
UniProt:
D2UX26
LinkDB
All DBs
AA seq
624 aa
AA seq
DB search
MVMDDDGSTTTDEASSSGAPSLSSINLSSHAQRFHQDHDTLSTTSSMSTFSSGSYSHFVP
DINNQSTSNGVATIVQQQPQQPVIKPIINTPTTISLLLRDENFNIHMEKIKEFVKLTNSG
KVIKTGESFQTDEEYPYILASNSYTLSIDQDIDQLFIQLKLLYSEKFKDLESNIIDPMTF
VNTVLRIGNGIPLVAPRGSQNFTDIDLSDILPPSTIMILKVTAANDGTFKVNLSEDKWKK
IEQICRDVILLDEHKEHILQYLSMRMSYVAPNLSLLVGTRIAAQLIGAAGGILLLSQTSA
DVIQCLGREKKKLEGFSTKTYMGMLPKRKQTSTDSKDGNYLLSYTANDFSHMRYTGFVGL
CDLVMEHTPPREKLRKKVARLVATKCALAARIDSCNSAKNGSEGLHLREDIQMAIKKMLE
PPKRKEDKPLPAPDSIKKSGSRGGSKSAAEKQLARTSELRKKYARLPFGESGSDDSYTGD
GSGTMLGDEGKKGLGRSLSVHNAILASGKRYENKHKKKEKKHTSGSSTGVNTALSSSSAY
FDGISTISNTSIFKSGTATQIIRTGTATSMAISNNNEMEILNPNLIAEDQKRKTEQKKGY
FSMDTKFKKPSDVMAPPSSTEKKK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggttatggatgacgatggatctactaccactgatgaagcaagttcttccggagcacca
tcactctcttctataaacttgtcgagccatgcccaaagattccaccaagatcatgacaca
ctttctacaacttcatccatgagtactttttcttcgggatcgtatagtcatttcgtccca
gatattaataatcaatcaaccagtaatggagtagctactattgtgcaacaacaaccacag
caacctgtcatcaagccaattattaatactccaaccacaatttcacttttacttcgtgat
gaaaatttcaacattcatatggagaaaatcaaggaatttgtaaaattgaccaacagcgga
aaagtcatcaaaactggagaatcgtttcaaaccgatgaagaatatccttatattttagcc
agtaattcatacaccttgtcaattgaccaggatattgaccaactgtttattcagttaaaa
ttattatattcggaaaagtttaaagatttggagagcaatattattgatccaatgactttt
gtaaatacagtattgcgaattggtaacggtattccacttgtggctcctagaggttcacaa
aatttcacagatattgatctgagtgatattttacctccttcaacaattatgattcttaaa
gtaacagcagccaatgatggtacctttaaagtaaatctatctgaagataagtggaagaaa
attgaacaaatttgtagagatgtcatacttttggatgaacataaggaacatattttacaa
tatctatctatgagaatgtcctatgttgctcctaatttgagcttattggttggaacaaga
attgctgcccaattaataggtgcagcaggtggaattttattactttctcaaacttcagca
gatgtaattcaatgtctgggaagagaaaagaagaaacttgaaggattttctactaagact
tacatgggtatgctcccaaagaggaaacaaacttcgactgactcaaaggatggaaactat
ctcctctcctatacggccaatgatttttctcatatgagatatactggatttgttggattg
tgtgatttggtgatggaacatactccaccaagagaaaaactgagaaagaaggttgctcgt
cttgttgccactaaatgtgctcttgctgcccgtattgacagttgtaattcggccaagaat
ggctcagaaggattacatcttcgtgaggatattcaaatggccatcaagaaaatgttagaa
ccaccaaaaagaaaggaggacaaaccactcccagccccagattctattaaaaagtctgga
tctcgaggtggttcaaaatcagcagctgaaaagcaattggccagaacttcagaattgaga
aagaaatatgccagattaccatttggagaatcaggttcagatgattcctatactggagat
ggatcaggaaccatgttgggcgatgaaggcaagaagggattgggccgatctctaagtgta
cacaatgcaattcttgcttctggcaaacgatacgaaaacaagcacaaaaagaaggagaaa
aaacatacatctggctcatcaactggggtcaatactgcactttcatcttcctcggcttac
tttgatggtatcagcacaatttcaaacacctcaattttcaagagtggtactgctactcaa
atcatcagaactggtactgccacttccatggcaattagcaataacaatgaaatggaaatt
cttaaccctaatcttattgcagaagatcagaaacgaaagacagaacaaaagaagggatac
ttttctatggatactaaatttaagaaaccatcagatgttatggcaccaccttcttccact
gaaaagaaaaaataa
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