Naegleria gruberi: NAEGRDRAFT_45350
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Entry
NAEGRDRAFT_45350 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
ngr
Naegleria gruberi
Pathway
ngr03440
Homologous recombination
ngr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NAEGRDRAFT_45350
03460 Fanconi anemia pathway
NAEGRDRAFT_45350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngr04121
]
NAEGRDRAFT_45350
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_45350
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_45350
Ubiquitin system [BR:
ngr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
NAEGRDRAFT_45350
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
NAEGRDRAFT_45350
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
NAEGRDRAFT_45350
FA (Fanconi anemia) pathway
Downstream FA components
NAEGRDRAFT_45350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
8863033
NCBI-ProteinID:
XP_002682600
JGI:
Naegr1_45350
UniProt:
D2UYY4
LinkDB
All DBs
AA seq
1792 aa
AA seq
DB search
MSHTTTNENVMTDEDQIVNIHTVEVVDEDDNLSINSDTLRALDDEQNNEEQQQQQPAELN
NTQELLDDLGGFNDDEDVNIDNYEEKPHSRKYSQIEDDDDVLENLDLTDLSPIIENPLKK
QKFDQIDENNRPVETFGFVSAKLTSSSKDEENISSEKPPATDGFVSAASNRPSETFGFVS
ASSNNRPAETFGFVSARPPTKYTYHPEEDDEKPAATEGFVSAAPSKRPPETFGFMKANGD
NFESETEENYQINKPAATDGFVSASTDKPSETFGFISASSNKPPATDGFVTAGKDSKKYT
YNPEEDEKPPATDGFVSAASNNRPVETFGFVSARPPTKYTYNPEEDDEKPPATEGFVSAK
PKTKFDSPTEIRPSETFGFVSARPASKYTYHPEEDDEKPAATEGFVSASNRPSETFGFVS
ASSNKPAPTDGFVSASNRTNENEMDISDERPPATDGFQSALDRPPPTEGFLSASNRPPET
FGFLKANTSTPAETDGFQVANNRPPATDGFVSSKSSSTFKTPSKNNVNIELSTPSNNSDI
FKTPSKVGSSLNKKTPATKRSIKNPFASLTTEQGDTKKETPTNRINETVKKKQKKFVTPI
KSKESFEEAKKRESERRSASTSSSSSISITKKTSDTTPITAPSWVPVKHHKSDSKEEVHV
KRRINTLGICEQLPIEKIKREGVSQYSITMTSISAKTFKFNLNDFKVSNEMIEAIVSLNG
NKRVVNFGSEEYERLLVHFGAKTSVVKTDWVENHYRWIVWKLASLDRTFPNDKSFPFLTP
EKVLGQLIYRYNVEFCKGKRSCLKMIAEKDIPPGQFMVLMVSSLSNNDNDMEECKTIELS
DGWYSMKAKLDEQLSRYLEWCKIRIGQKLRIVGASFVENFEPAPPLELPGNACLKLSING
VRKAHWDTTLGFQYGRMPFKVSFKSIQSNGGNIPCIRAIVKRVYPQKFLEKITDESGTVS
TIIRTKQAEDYISAINEKEREKLMATLQPTYYDEEKKKIIGPKKNITTPIKRIYEGSVLY
KLLSECRDESSFYAQLNETQHQNLENYQRNIESEIQSRVSQRLTTTLDQHPTLNRNVSAM
VTVRLGDCCPYSKNPGVTMNDKEMIITLWIADEDNESFQEGNIIDIYNSRSSKQSGSQVM
KSISAISHTKVEIVKNWKDLTDEEMKVYSYVPRSCINFTQVKNPDCRQHNNEFDFAGILV
YTKEIEQREKESTLKLLYFVDSTSFNISESSYSKNPIIMQVRYYESNKKQFRWFLTPGKV
YYMANVTYSDFDETNNRIKCFANEQTFISERATKQHFKSASSEINAFLKNNREKCLSLES
VIDQFSFREEDYTTPRKSISSNNDMEDDFSLDQEINCNPIIDGDHQIQITLLDGGYNVIE
TYVYPKDNNISYKRAEDTYSFYVKLYIETKEECYSIKFTEDMFDKLANCLYFEEANNAGF
HQFNLQDILQSETIPEWIKTLVIADGFPSSSSSYNDNNNNNITFPSSTTNPSTISSLLLE
RNQFYRKLAGVNRSNSTSKLLDRNFCCILPHNLSLGDVKQTICRQYQSIFYDKVTEGFEF
DNSDAFTLSRLYSDLGLELGLWNTQLKASDIFTDEQVVFAKLDCSRKQKIKLKEKYQQTE
QYLSPPDSDKEQSNTALFETPKKRKPTSNFLTPQSKKKKPITPPSITSGDDSDSSVSDSE
DEAGATRPVTSATLKQTAENPIVIQSDEESEESEEEEEEEETPVKKPQPKKQELKQETKK
PEKKQPEKEESEVEDSEEELKSDSDKDVMTHRSIRQILCKYQALVKGKVCWW
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacaccacaacgaacgaaaatgtgatgacagacgaagatcaaattgtcaacata
cacactgtggaagtggttgatgaagatgataatttatctataaattccgatacattaaga
gcattggatgatgaacaaaataacgaagaacagcagcaacaacagcctgccgaattaaat
aatacacaagaattgttggatgatttgggaggatttaacgatgatgaagatgtaaatatt
gataattatgaggaaaaaccacatagtagaaaatactctcaaattgaggatgacgatgat
gtattggaaaatttggatcttaccgatctttctccgattattgaaaatcctctcaagaaa
caaaaattcgatcaaatagatgaaaataatcgaccagtagaaacatttggatttgtttct
gctaaattaacttcatcgagtaaggatgaagaaaatatatcgagtgaaaaaccacctgcc
acagatggttttgtgtctgctgcttcaaatagaccttcagaaacatttggatttgtttca
gcttcctcaaataatagacctgcagagacttttggattcgtctctgccagaccacctaca
aagtacacctatcatccagaggaggacgatgaaaaaccagcagcaactgagggttttgtt
tcagcagctccatcaaaacgtccaccagaaacatttggatttatgaaagcaaatggagac
aattttgaatcagaaactgaagaaaattatcaaattaacaaaccagcagcaacagatgga
tttgtttctgcctccactgacaagccttcagaaacttttggatttatttcagcctcttca
aacaaaccacctgctacagatggatttgtcactgcaggcaaagattccaaaaagtatact
tataaccctgaggaagacgaaaaaccacctgctacagatggttttgtgtcagctgcctca
aataatagaccagtagagacttttgggtttgtttctgctagaccaccaacaaagtataca
tataaccctgaggaagacgatgaaaaaccaccagcaactgaaggttttgtttctgctaaa
ccaaaaactaaatttgattcaccaactgaaataaggccatccgaaacatttggatttgtt
tctgccaggccggcctccaagtatacctatcatccagaggaggacgatgaaaaaccagca
gcaactgagggttttgtttctgcctcaaatagaccttcagaaacttttggatttgtttca
gcctcttcaaacaaaccagcaccaacagatggatttgtatccgcctcgaatagaactaac
gaaaatgagatggatatttcagatgaaagaccacctgccacagatggttttcaaagcgcc
ctagatagaccaccaccaactgaaggatttttgtctgcatctaatagaccaccagagaca
tttgggtttttaaaggcaaacacaagcactcctgccgaaactgatggatttcaggttgcc
aataatcgtccacctgcaacagatggattcgtatcgtctaaatcgtctagtactttcaaa
actccttcaaagaataatgtaaatattgaattatccacacctagtaataatagtgacata
tttaaaacaccaagtaaggttggtagctcacttaataagaaaacacctgctacgaagaga
agtataaagaatccatttgcttctcttaccacagagcaaggtgacactaagaaggaaact
cctacaaatagaatcaatgaaactgtaaagaaaaagcaaaagaaatttgtaactccaatc
aaatcgaaggaaagttttgaagaagctaaaaaacgtgaaagtgaaaggaggtcagcttcc
acttcttcttcttcgtcaattagtatcacaaagaaaacttctgacacaacaccaataaca
gcaccaagctgggtacctgtaaaacaccacaaatctgattcaaaggaggaagttcatgta
aaaagaaggataaatactttgggaatatgtgaacagctacctattgagaagattaagaga
gagggagtatcccaatattcaataacaatgactagcatttccgccaagacatttaaattt
aatttgaatgatttcaaagtatcaaatgaaatgatagaagcaatagtgagccttaatgga
aacaaaagagtagtgaattttggaagtgaagaatatgaacggttattagtacattttggt
gctaaaacaagtgttgtaaaaactgattgggttgaaaatcactataggtggattgtttgg
aaattggcaagtctcgataggacattcccaaatgacaagtcttttccatttttgactcct
gaaaaggttttaggacaactaatttataggtataatgttgaattttgtaaaggaaaaaga
tcatgtttgaaaatgattgctgaaaaggacattcctcctggtcaattcatggttctgatg
gtatcatctttatcaaataacgataacgatatggaagaatgtaaaactatagaacttagt
gatggttggtacagtatgaaggcaaaattagatgaacaactatccaggtatttggaatgg
tgcaagatacgtataggtcaaaaattgagaattgtaggagcatcttttgttgaaaatttt
gaacctgctcctcctttggagttgcctggaaatgcatgtttaaagctgagcattaatggt
gttagaaaggctcactgggataccacattaggattccaatacggaagaatgcctttcaaa
gtttcattcaaatccattcaaagcaatggaggaaatattccttgtatcagagccattgtt
aaaagagtgtatccacaaaagttcttggagaaaatcactgacgaaagtggtactgtctcg
acaatcattagaactaaacaagctgaagattacatctctgctattaatgagaaggaaaga
gaaaaattaatggctacacttcaaccaacctattacgatgaagaaaagaagaaaattatt
ggacctaagaaaaatatcacaacaccgatcaagagaatttatgagggatctgttctttac
aagctcttatcagaatgcagagatgagtcatcattttatgcccaattgaatgagacacaa
caccaaaatttagagaattaccaacgtaacattgagagtgagattcaatcaagagtttct
caaagattaacaaccactttggatcaacatccaactctcaatagaaatgtctctgctatg
gtaactgttagattgggtgattgctgtccttattcgaaaaatcctggtgtaacgatgaac
gataaggaaatgattattacgttatggattgcagatgaagacaatgaatcttttcaagag
ggaaatattattgacatttataatagtagatcatccaagcaaagtggaagtcaagttatg
aagtcaatttcagcaatttctcatactaaagtggagattgttaaaaattggaaggacttg
acagatgaagaaatgaaggtctatagctatgtaccaagaagttgtatcaattttactcag
gtgaaaaatccagactgcagacagcacaataacgaattcgattttgcaggaatactagtt
tatacaaaagaaatcgagcagagagaaaaagaaagtaccctaaagttactctactttgta
gattctacttctttcaatatttcagaatcctcatattctaaaaatccaataattatgcaa
gttagatattatgaatcaaataagaaacaatttagatggttcctaactccaggaaaagtt
tattatatggcaaatgttacctattcagactttgatgaaactaacaatagaatcaagtgc
tttgccaatgaacaaactttcatttctgaaagagcaaccaaacaacatttcaagtcagca
tccagtgaaattaatgctttcttgaaaaacaatagggaaaaatgcctttcactagaaagt
gttatcgaccaattttcatttagagaggaagattatacaacacctcgaaagtcaatatca
agcaataatgacatggaggatgatttcagtcttgaccaagaaattaattgtaatccaatt
attgatggcgatcaccaaattcaaattacattattggatggaggatacaatgttattgag
acgtatgtatatccaaaggataataatattagctacaagagagctgaggatacatattct
ttttatgtaaaactctacattgaaacaaaggaagagtgttattccattaaatttacagag
gacatgtttgacaagcttgctaactgtctctattttgaagaggcaaacaatgcagggttt
catcaattcaacttgcaagacattttacagtcagaaaccataccagaatggattaaaact
cttgtaattgccgatggttttccttcatcatcgtcatcttataatgataacaataataat
aacattacttttccatcctcaacaacaaatccttcaacgatcagttcgttacttttagag
agaaatcaattttatagaaagttagccggtgtaaataggtccaactctacgtctaaattg
ttggacagaaacttttgctgtattcttccacataatttatcgcttggtgatgtcaaacaa
acaatatgtagacaatatcaatcgatattttatgataaagttacggaaggttttgaattt
gacaattctgatgcctttactctttctcgtttatattccgacttgggattagagttgggc
ttgtggaatacacaacttaaagctagtgatattttcactgatgaacaagtagtatttgcc
aaattggattgttcacgaaaacaaaaaattaaactgaaagaaaaatatcaacaaacagaa
caatacctctcaccaccagatagtgataaggaacagtccaacactgctctttttgaaaca
cctaaaaagagaaaaccaacaagtaattttttaacacctcaatccaagaagaaaaaacca
attactccaccaagtattacaagtggtgatgatagtgattcttctgtgagtgattcagaa
gatgaggcaggggctactcgtccagtaacaagtgccacattgaaacaaacagcggagaat
cctattgtaattcaatcggatgaagaatctgaagaatcagaagaggaagaggaagaagaa
gagacaccagtcaagaaaccacaaccaaagaagcaagaattaaagcaggaaacaaagaaa
ccagaaaagaaacaaccagaaaaagaggaatctgaagttgaagactctgaggaagaactg
aaatcagattctgataaagatgtcatgactcacagatcaatacgccaaattctttgcaaa
taccaagcactggttaaaggcaaagtttgctggtggtaa
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integrated database retrieval system
