Naegleria gruberi: NAEGRDRAFT_45594 Help Entry NAEGRDRAFT_45594  CDS       T01241                                  Name (RefSeq) hypothetical protein   KO K12830   splicing factor 3B subunit 3 Organism ngr  Naegleria gruberi Pathway ngr03040   Spliceosome Brite KEGG Orthology (KO) [BR:ngr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     NAEGRDRAFT_45594  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ngr03021]     NAEGRDRAFT_45594    03041 Spliceosome [BR:ngr03041]     NAEGRDRAFT_45594    03036 Chromosome and associated proteins [BR:ngr03036]     NAEGRDRAFT_45594 Transcription machinery [BR:ngr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      NAEGRDRAFT_45594 Spliceosome [BR:ngr03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     NAEGRDRAFT_45594  Complex B     NAEGRDRAFT_45594  Complex C    U2 SnRNP specific factors     NAEGRDRAFT_45594 Chromosome and associated proteins [BR:ngr03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      NAEGRDRAFT_45594     TFTC complex      NAEGRDRAFT_45594 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd WD40_CDC20-Fz WDR90_beta-prop_4th Motif Other DBs NCBI-GeneID:  8863007 NCBI-ProteinID:  XP_002682770 JGI:  Naegr1_45594 UniProt:  D2V007 LinkDB All DBs AA seq 1216 aa AA seqDB search MHLYHFTLVKPGSINQAISGCFSGKKYDILTEKHYRPTEIVMAKGNILELYECEENGNLK CLISQDVFGVIRSITSFKFSNTVEKDYIAIGSDSGSIVILEVNSNLNKFTQIHHETYGKT GCRRIVPGQYLAADPKGRALMIGAVEKQKFVYVLNMDGDHLTISSPLEGHSQNTLVYSMV GLDVGFDNPAFACIEVNYEGADESDVAYQSLKKMLTIYELDLGKNTIVKKSSEEIDRSAN LLIQIPEPLGGVLVCSENYITYKKEGQDDVRSPIPRRSGMPQERGLMIINSNLKVKKGGD IFLLAQNELGDLYRVSFNKDGNRVSSVSLQYFDTIPVSNSFLALKNGNLFCASEFGDHKC YKITKIEPNEYPETYESIGSETFPTFTPPMNRFEALMSDNDQPSTTNVTCLELVNEIKSL APVTDMKVTDLMGEGTPQIYCLNGRGPTSSLRSLRYGLPVNEEVAAPLDQQATAIFTVKE SMNDTFDKYIILSFSEFTMVLSVGENVAEVTESGFLTTTKTIYASNIGESGEFVQVHPKG IRHIHPDRVNEWNSGNKIIEKAAVNGYQIVVSLSGGEIIYFEYDTSSGNLIETERNDLSQ DVACLALSPIQDGRTRGRFLAVGFYDKTVRLISLGEYDMMSILSRQALPADPESLSLIEL QSGHSRDETSLYLNIGLSNGILLRSTVDSSTGELSDTRSRFLGTKGVKLRNVKVRGDNAI LALSSKPWLGNSINGKIEMTPLSYPALNSACNFSSEQIRDGLVSITAEHLRIITISSLLD KFTPEIIPLNYTPRKFVVHDETSHMIILQTDHNVSKENSTDRPDYIKVDESQKDPSLSKD VEYGAIKTKPKSNLWASYIRVYSPKKQANLDEFEIEDNEAAFSITTCKFSTSLSGAKSNE SLIIVGTAKNMKLYPTRTCDCGYINVFQISEDGKLQLIHKTEVEDVPYALHAFRGRLLVG VKNMLRIYDLGKKKLLRKCENKSFPNFITSIAVDGNRIFVGDITESFHFVKFNSSENSLT IFADNTTPRWLTASALVDHNTIAGGDKFGNFFISRLPSDVSDELEDSSTGKEKWIWERGL LNGAPQKATEIVKFYVGSMITSIYKTSLIAGGPSILIYTTITGAVGVFFPFTSKKDIEFF TQLEMHLREKNPPLCGRDHLAYRSYYFPVKSVVDGDLIEQFNDVDLQTKTKISEDLQRTI NEIAKKIEDMKNQTGL NT seq 3651 nt NT seq  +upstreamnt  +downstreamnt atgcatctctaccactttacactcgtcaaaccgggaagtattaaccaggcgatcagtggt tgtttttctggtaaaaagtatgatattttaacggaaaagcactacagaccaacagagatt gtgatggccaaaggaaatattctagagttgtatgaatgcgaggaaaatggaaatcttaaa tgtttaatatcacaagatgtctttggagtaattagatccatcacatctttcaagtttagt aatactgtagagaaggattatattgccattggatccgattcaggaagtattgttattttg gaggtcaatagcaacttgaacaaatttacacaaattcatcacgagacatacggaaagact ggctgcagaagaattgttccaggacaatatttggctgctgatccaaagggtagggctttg atgattggagcagttgaaaaacaaaaatttgtctatgttttgaatatggatggggaccat ttgacaatatcatcaccattggaaggtcactcacaaaatactctagtttattctatggta ggcttggatgtagggtttgacaatcctgcctttgcttgtattgaagttaattatgaaggt gctgatgaatctgatgtagcttatcaatctttgaaaaagatgcttactatttatgaattg gatctaggaaaaaacactatagttaaaaaatcatcagaagaaattgacagatcagcaaat ttattgattcaaataccagaaccattggggggtgtgttggtttgttctgaaaattatatt acatataagaaagaaggtcaagatgatgtaagatctcctattccaagaagaagtggcatg ccacaagaaagagggcttatgatcatcaattctaatctcaaagtcaaaaaaggaggtgat attttccttcttgctcaaaatgaattgggtgatctctatagagtttcatttaacaaggat ggcaatagagtaagcagtgtatcactccaatactttgatactattcctgtttccaactca ttcttggcattgaaaaatggaaatttgttttgtgcctctgaatttggtgatcacaagtgt tacaaaattacaaagattgaaccaaatgaatatccagaaacttatgagtctattggaagt gaaaccttcccaacatttactccaccaatgaatagatttgaggcattaatgagcgataat gatcaaccatcaacaacaaatgtcacatgccttgaacttgtcaatgaaattaagagttta gctccagttactgatatgaaagttacagatttaatgggagaaggaactccacagatttat tgtcttaatggtagaggaccaacctcctcattgagatctttgagatatggtttacctgta aatgaagaagttgctgctcctttggatcaacaagcaacagccatatttacagtcaaagaa tcgatgaatgacacatttgacaagtatatcattctttcattttccgagttcacaatggta ctttctgttggtgaaaatgttgcagaagtgactgaatctggttttttgactacaacaaag actatttatgcttcaaatattggagaatctggagagtttgtacaagtacatccaaagggt atcagacatattcaccctgatagagttaacgaatggaactctggtaacaagataattgaa aaagctgccgttaatggttatcaaattgttgtatcgttgagtggaggagaaattatttat tttgaatatgacactagttctggaaatttgattgaaaccgaaagaaatgacttgtcacaa gatgtagcctgtttagcattgagccctattcaagatggtcgtaccagaggtcgtttcttg gcagtaggattttatgacaagactgtaagattaatatccttgggagaatatgatatgatg tcaattttatcaagacaagccctacctgctgatcctgaatctcttagcttgattgagctt caaagtggccactcaagagatgaaaccagtctttacttaaatattggtttgagtaatggt attctattaagatcaactgtggactcctctacaggagaattgtcagatacaagatctagg tttttaggtacaaagggcgttaaattaagaaatgttaaagttcgtggagacaatgcaatt cttgccctttccagcaaaccttggcttggtaatagtattaatggaaagattgaaatgaca cctctttcttatccagcccttaatagcgcatgcaatttttcatcagagcaaattagggat ggactagtctctatcactgcagaacatttgagaattattaccatttcttcacttctagac aagtttactccagaaattattcctctcaattatacaccaagaaaatttgtagtacacgat gaaacttcacacatgattattttgcaaactgatcacaacgtttcaaaggaaaattcaact gatagacctgactatatcaaagtagacgaaagtcaaaaggatccttctctctccaaagat gtagaatatggagctattaaaaccaagccaaaatctaatctttgggcttcatacatcaga gtttactcaccaaaaaagcaagcaaatttggacgaatttgaaattgaagacaatgaggct gcttttagtattacaacttgtaaattttccacttccttgtctggggcaaaatcaaatgag agcctcattattgttggtacagctaaaaacatgaagttataccctactagaacatgtgat tgtggttacattaatgtattccaaataagcgaagatggaaagttgcaattaattcacaag acagaagttgaggatgttccatacgcacttcatgcattccgtggcagactattggtcggt gtaaagaacatgttgagaatttatgatttgggtaagaagaaattactgagaaaatgtgaa aataagtcattccctaatttcattacctccattgcagtagatggaaatagaattttcgtt ggtgatattactgaatctttccattttgtcaaatttaattcttcagaaaactctctgaca atatttgctgacaatacaacaccaagatggctcaccgcctctgcacttgttgatcacaat actattgcaggtggtgacaagtttggaaactttttcatatccagattaccaagtgatgtt tctgatgagctagaagattcaagcactggtaaagaaaaatggatttgggaaagaggatta ttgaacggagcaccccaaaaagcaactgaaattgtcaagttttatgttggctccatgata acaagtatttacaaaacaagtcttattgctggtggaccgtccattcttatttacacaacc attactggtgcagttggagtattcttcccatttacatcaaagaaggatatcgaattcttt actcaactcgaaatgcacctgagagagaaaaatccaccattgtgtggaagagaccacctt gcttaccgttcctattacttccctgttaagagtgttgttgatggtgatttaattgaacaa ttcaacgatgtcgacttgcaaacaaaaactaaaatttcagaagacctgcaaagaaccatc aacgaaattgctaaaaagattgaagatatgaagaaccaaactggtttgtaa

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