Naegleria gruberi: NAEGRDRAFT_46260
Help
Entry
NAEGRDRAFT_46260 CDS
T01241
Name
(RefSeq) hypothetical protein
Organism
ngr
Naegleria gruberi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DEAD
Helicase_C
HTH_61
ResIII
POLQ_helical
DUF4332
HHH_5
DNA_pol_lambd_f
Cdd1
Motif
Other DBs
NCBI-GeneID:
8855116
NCBI-ProteinID:
XP_002681870
JGI:
Naegr1_46260
UniProt:
D2V2V4
LinkDB
All DBs
AA seq
1648 aa
AA seq
DB search
MISNNNHNKNKSQPTNVVAATPLPKTLKNVSNPSSASSVSTTTPKSTGEASVDFWPPFSQ
SSRSSMSVGSPSTPEDEYYFNIDEDLELSDISDIEVEQLENLDDDELNIGEESENTLDDE
LDISGIVNLLDEADSNNTIPSSDKTFSNTSNLLNTSLKATHTEDDMNDPTSLYHYIPYQI
ADNYKHKSLYPWQVALLENNQILDGGKNIIYSSPTSGGKTLVSEIIMVRRLTRNKSKVVF
MLPFKAIIEEKVADLNEKFKNVGWKANPYHSEAVKLIDTASFNDDDERVMVCTFERGNSI
LNGLIRTGKIDEIGTIIIDELHSITEPDRGYILELILTKIIYLKPKIQIIAMSATLPNVD
KLASFLNAYLFVTDYRPVPLSEYMVHDSKVFDTNCNLVRNLTPYTVSKKLPDGFNISILS
LIDTEFATIIFCSSKLKCKLFAKFIAEENQPQHIPEHLVQQRQELLTNLKLSTTGLDPDL
NFSMGRGVGFHHSSLTMEEKKLVELAFRNGMIKILLCTTTLATGVNLPARRVIISSLTMG
RDDLSIVNYKQAAGRAGRAGIDVKGESYLIVPSLESGSKLLSSKFTPMKSCLNEKHISRA
LLENISTGIIRTAHDIVSYLKCTFLSKCIPEKELRSIGINSKVFLEKNGFIRWINGKDSF
DCKPLGFATQIANICPYLSLKFYQTIKNELKNFYLEDDLGMIYILASFSENSLFHTDYND
TFSKVAEKIVNIAIKRREFSEFVNNKIRDINELRGYILSVGNRSSHQRELSETIYTLRKT
FILYDIILEYPIKNIAETYFGDSDARGSVQNVQKDAASKASVLSSFCKYAALPSFFSEAF
KEIKERLVSGVRQELVPLVQIPFVGSSRARLLFSAGLRTIAQVADETPESIENILVKGSQ
NTTESRTKANLIVEGAKAIVEEKLLPLEWIFGPQDEDTFLFQNSSPKKRGKKRCNAFDDN
QAEHKKKKEDSVIELKLGDNQLFDEFLERWNNSKVFSFCFEFGIKKKQDNPTTFIKNRDV
YTVKGLSICFNEVFEDYLTFEKRCETKIDPNIPCKCYFIHLDDYRSKIVKRMLQDKRKPK
LTFGFKKQQTRLLQAWDLIVKDPVLDPMIGDWVQHPDDSDNEKTLEEIYLKYFPSDSFLF
TPKNDKFVIVKTASQCWPIMTAVMVSIINLELRQMFEFEMSFSKVLSTMEHNGIRFNYHW
IKHNTKLIDAKLDEITRDLNSLQILDGKKIDVSNNDHVALLLFDKLKLKGTERKTNKEIL
EKLKKLYPDKSYIMKQISEYRYLLNIKTHHIQNMPNDIKYCPDTQEYRIFASQMQTTSAT
GRLSVKNPNLQNIPNDIDIKDPFSQKSIITLSIRSAFIPRNGYVMVSIDYKNIELRILAH
LSQDRTLSDILSNTERDIFEEIARNFWNFRPEEPVPLSHRSLVKQIIYGISYCMGSETLS
GKMFNSENEDFMLRPGEDRIEAAERYKQNFFEKYQGLKQYKDFVENHLVEKHYVETSYSR
KRFIHDICSDDSSKRAAARRAALNTVSQGSASDIMKIVMLGIYSFMRHFNKKEERAYMLL
QIHDELLFEVREDSLSTFIYCTKNIMQNTDKKLLVPLPVKVQIGDSWGTLKDYPSSIPLT
NEEKDEIRNLSVCLGFDWKEKLGVTDNF
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgatttccaataacaaccacaacaagaacaaatcacaaccaacaaatgtggttgcagca
acacctcttccgaaaacattgaaaaatgtatccaatccttcttctgctagtagtgtgagt
accaccactccgaaatcaacaggtgaggctagtgtggatttttggccaccatttagtcaa
tcatcaagatccagtatgtctgttggtagtccatcaacacccgaagatgaatattatttc
aatattgatgaagatttagaattaagtgatattagtgatatcgaagttgaacaattggaa
aatttagatgatgacgagttgaatattggagaagaatcggaaaatactctagatgatgag
ttggatattagtggaattgtgaatttattagatgaagctgattcgaacaatacaattcct
tcttccgataaaactttttccaatactagtaaccttctcaatacatcactaaaagccact
catacagaggatgatatgaatgatcccacatccctctatcattacattccctaccaaatt
gctgacaattacaaacacaagtctttatatccttggcaagtagcattattagaaaacaat
caaattctggatggaggaaagaatattatctactcatctccaacaagtggaggtaaaacc
ctagtcagtgaaattataatggttcgaagattgacaagaaacaaatcaaaagttgttttc
atgcttccttttaaagctatcattgaggaaaaggtagctgatttgaatgaaaaattcaag
aatgttggatggaaagccaatccctatcactctgaagcagtaaaactcattgatacagca
tccttcaatgatgatgatgagagagtgatggtatgtacctttgagagaggaaatagtatt
ctgaatggattgattaggactggcaaaattgatgaaattggaaccatcattattgatgaa
cttcatagtataacagagcctgatagaggttatattctagaactcattctaacgaaaatt
atttatcttaaaccaaaaattcaaatcattgcgatgtctgctaccctaccaaatgttgac
aaacttgccagttttcttaatgcctacttgtttgtgactgattatagaccagttccactc
tctgaatacatggtacatgattccaaagtattcgatacaaattgtaatctagtaagaaat
ctaacaccttacactgtttctaaaaaactacctgatggatttaatatttccatactatca
ctaattgacacagagtttgctacaattatattctgcagctctaagctaaaatgtaaatta
tttgccaagtttattgctgaagaaaatcaaccacaacatattccagagcacttggtacaa
caacgacaagaattactaactaacctcaaactatccacaacaggattggatcctgatttg
aatttttcaatggggagaggagtaggttttcatcactcgtcactaacaatggaagagaaa
aagttagttgaattggcatttagaaatggaatgatcaaaattctactatgtacaacaacc
cttgcaactggtgtgaatcttcctgcaagaagagtcattatttcctcactcaccatgggt
agggatgatttatcaatagttaactacaagcaagcagctggtagagcaggtagagcaggt
atagatgtaaagggtgaatcgtatcttatagttccttcgttggagtctggttcaaaatta
ttatcttccaaattcacacccatgaaatcttgtctaaatgaaaaacacatatcaagagct
ttattggaaaatatttcaactggtattattaggactgctcatgatattgtgtcctattta
aaatgtacatttctatcgaaatgtattccagagaaagaactcagaagtataggaatcaac
tcaaaagtttttctggaaaagaatggatttattagatggataaacggtaaagactccttc
gattgtaaaccattgggatttgcaacacaaatcgccaatatttgtccctatctttctctc
aagttttaccaaaccattaagaatgaattgaaaaatttctacttggaagatgatctagga
atgatttacattcttgcctccttctctgaaaatagtctatttcatactgattataacgat
acattctcaaaagttgctgaaaaaattgtaaatattgccatcaagagaagagagttttca
gaatttgtaaataacaagattagagacattaatgaattgagaggttacatcttgtcggtg
ggaaatagaagtagtcatcaacgagaattgagcgaaactatctacacattgagaaaaaca
tttatactctatgacattatactggaatatccaatcaaaaatattgcagagacatatttt
ggagactcagatgcaagaggatctgtacaaaatgttcaaaaagatgctgcctcaaaagca
tctgtactctcaagtttttgtaaatatgctgccttaccaagctttttctcggaagcattc
aaagaaatcaaagaacgacttgtttctggagtgagacaggaacttgtacctcttgttcaa
attccatttgttggttcatcaagagcaagattgttattcagtgctggtctcagaacaatt
gcacaggttgctgatgaaacaccagaaagtatcgaaaatatacttgttaaaggctctcaa
aacacaacagaaagtagaactaaagctaatttgattgtagaaggagcaaaggcaattgta
gaggagaaattacttcctttagagtggatatttgggccacaagacgaagatacattccta
ttccaaaatagctctccaaaaaagagaggaaaaaagagatgtaacgcctttgatgataat
caggcagagcacaaaaagaaaaaggaagattctgtgatagaactaaaacttggtgataat
caattatttgatgagtttttggagcgttggaataattcaaaagtattttcattctgtttc
gaatttggaattaagaaaaagcaagacaatccaaccacctttattaagaatagggatgtt
tatacggtgaagggactctcaatttgttttaatgaagtatttgaggattatttaactttt
gagaagagatgtgaaaccaaaatcgatccaaatattccttgcaaatgctattttatccat
ctagatgattatagatccaagatagtaaaacgaatgctgcaagacaagagaaaacccaaa
cttacattcggatttaaaaaacaacaaacaagactcttacaggcttgggacttaattgtt
aaagatcccgtacttgatccaatgattggagactgggtacaacatccagatgattcggat
aatgagaaaactcttgaggaaatatacttgaaatatttcccatctgattcatttctattt
actcccaagaatgacaagtttgtcattgtaaagacagctagccaatgttggccaataatg
actgctgttatggtatccattattaatttggaattgagacaaatgtttgaatttgaaatg
agcttctccaaagttttaagcacaatggaacataatggaatacgtttcaattatcattgg
atcaaacataatacgaaactcatagatgctaaactcgatgaaattacaagagatttgaac
agtttacaaattttggatggtaaaaagattgatgtgtccaataatgaccatgttgcatta
ctcctctttgataaattaaaacttaagggtacagagaggaaaacaaacaaggaaatattg
gaaaagttgaaaaaactctaccccgataagtcttatattatgaagcaaatcagtgaatac
agatacttgctgaatattaagactcatcacattcaaaacatgcccaatgatatcaaatac
tgcccagacactcaagaatatagaatatttgcctctcaaatgcaaaccacttcagcaact
ggacgcttaagtgtcaagaatccaaaccttcaaaatattccaaatgatatcgacattaag
gaccctttctctcagaaatccataatcacactgagtattagaagcgccttcatcccaaga
aatggttatgtaatggtttcaattgattataagaatattgaattgagaattttagcccac
ctctcacaagatagaaccctttcagacattctcagtaatacagaaagagatatttttgag
gaaattgctagaaacttttggaattttagacctgaagaaccagttccattatctcataga
agtctggtcaagcagatcatttatggaatttcctattgtatgggctcagaaactctctct
ggtaaaatgttcaatagtgagaatgaggattttatgttgaggcctggtgaggatagaatt
gaagctgctgaaagatacaagcaaaatttttttgaaaaatatcaaggattgaagcaatat
aaggactttgtagagaatcaccttgtggaaaagcactatgttgaaacctcatattcaaga
aagagatttatccatgatatttgttctgatgattcatcaaagagagctgcagctagaaga
gctgctctcaatactgtttctcaaggctctgcctctgatattatgaaaatagtcatgtta
ggtatttattcatttatgagacattttaataagaaagaagaaagagcatacatgttacta
caaattcatgatgagctactctttgaagtgagagaagactctctcagtacatttatctat
tgtacaaaaaatattatgcagaatacagataagaaacttctagtaccactgcctgtaaag
gttcaaattggagattcatggggtactttgaaagattaccccagctcaataccactcacc
aatgaagaaaaggatgagataaggaatttgagtgtatgtcttggatttgattggaaggaa
aagttgggtgtcactgataatttttaa
DBGET
integrated database retrieval system
