Naegleria gruberi: NAEGRDRAFT_47353
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Entry
NAEGRDRAFT_47353 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NAEGRDRAFT_47353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_47353
Enzymes [BR:
ngr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
NAEGRDRAFT_47353
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
NAEGRDRAFT_47353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
FtsK_SpoIIIE
MMR_HSR1
GTP_EFTU
AAA_29
nSTAND3
Chlorosome_CsmC
KARI_N
Motif
Other DBs
NCBI-GeneID:
8860249
NCBI-ProteinID:
XP_002679661
JGI:
Naegr1_47353
UniProt:
D2V7R2
LinkDB
All DBs
AA seq
432 aa
AA seq
DB search
MPPHAKKPKETPLTESEHEVTLKYGQAIIIKNSTIKKIQITDGVLNIFGTEFNANGEEGG
VLDFSAGGELIEVVGMNMSLEKKDTTLKMNILGEAEQAFTTVESNPKFMESVFETFDKIK
GGMNHVRVLIVGQTDSGKSTLSRILFNHALFSNERDQEERICAFADIDVGQNQLSIPGSM
SMVYELPSHESYSKVDSVMKSNPLATIVNSHAFNFGDISPKSTIYYDHICKQMTTYYDNI
IKKNADVKKSMWIINTCGWVEGQGYELIKNAISSCNITHVISFDQNTTRNLERDTKNVVI
IPLEKSSHVKKRSTNFRKDTRAANFNSYFSNRLNTLTLPLDKVKLCMIDYKTQNSARALT
VSDKSLNRINSISTADNLKDVANKEVRMFVVLQAFNPEKNTITLLLPGKEKKESFENLEN
PLQLLGGSIIWK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccaccacacgcaaagaagccaaaagaaacaccactcaccgaatcggaacatgaagtt
acattaaaatatggacaagcaataattattaaaaattccaccattaaaaagatacaaatt
actgatggagtgttgaatattttcggaacggaatttaatgctaatggagaagaaggtggt
gttttggatttttctgcaggtggtgaattgattgaagttgttggtatgaatatgagtctg
gaaaagaaggatactacattaaagatgaatattttgggagaagctgaacaagcatttact
actgtggaaagtaatccaaaatttatggaaagtgtatttgaaacttttgataaaattaag
ggaggaatgaatcatgtgagagtattgattgttggacaaactgatagtggtaaatcaact
ctatcaagaattttattcaatcatgccttgttttccaatgagagagatcaagaggaaaga
atttgtgcatttgctgatattgatgttggacaaaatcaactttcaattcctggaagtatg
agtatggtctatgaattgccatctcatgagagctattcgaaagttgactctgtgatgaag
tctaatccacttgccactattgtgaatagtcatgctttcaactttggagatatttcacca
aaatccacaatttattacgatcatatctgtaagcaaatgacaacatactatgataatatt
atcaaaaagaatgctgatgtgaagaaatcaatgtggatcattaatacatgtggatgggtt
gaaggtcaaggatatgaacttatcaagaatgccatctcctcatgcaatataactcatgtc
atttcattcgatcaaaatactacacgtaacttggaaagagacaccaagaatgttgtaatt
attcctctcgaaaagagtagtcatgtgaaaaagagaagtaccaatttcagaaaagacacc
agagctgccaatttcaattcctactttagtaatagattgaatactcttaccttaccattg
gataaggtgaaattatgtatgattgattacaagactcaaaattcagcaagagctttgact
gtgagtgataagtcattgaatagaattaattcaatttctacagccgataatcttaaagat
gtggcaaacaaggaagttcgcatgtttgtcgtattgcaagcattcaacccagaaaagaat
actattacattattattgcctggaaaggaaaagaaggaatcatttgaaaatcttgaaaat
ccattacaacttcttggtggttccataatctggaagtaa
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