Naegleria gruberi: NAEGRDRAFT_4809
Help
Entry
NAEGRDRAFT_4809 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ngr
Naegleria gruberi
Pathway
ngr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NAEGRDRAFT_4809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_4809
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_4809
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NAEGRDRAFT_4809
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NAEGRDRAFT_4809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_12
zf-CCCH_DUS3L
zf-CCCH_3
zf-CCCH_RBM22
zf-CCCH_tandem
Motif
Other DBs
NCBI-GeneID:
8852355
NCBI-ProteinID:
XP_002681511
JGI:
Naegr1_4809
UniProt:
D2V3G6
LinkDB
All DBs
AA seq
105 aa
AA seq
DB search
EKEVVCKHWLRGLCKKGDGCEFLHQYKAGKMPECHFFSEYGECSNVECIFLHIKPEDRIK
TCPWYERGFCKHGPDCRLKHLRKIACPDYLAGFCAKGPNCKFSHP
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
gaaaaggaagttgtatgtaaacattggctgagaggtttatgtaaaaaaggtgacggatgt
gaatttcttcatcaatacaaagctggtaaaatgccagaatgtcacttcttttctgaatat
ggagaatgtagtaatgtcgaatgtatctttttgcatattaaacctgaagacagaattaaa
acatgcccttggtatgaaagaggattttgtaaacatggacctgattgtagattaaaacat
ttaagaaaaattgcttgtccagattatttagctggattttgcgctaaaggtccaaattgt
aaattttcccatcct
DBGET
integrated database retrieval system