Naegleria gruberi: NAEGRDRAFT_48963
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Entry
NAEGRDRAFT_48963 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_48963
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
NAEGRDRAFT_48963
microRNA pathway
RISC loading complex
NAEGRDRAFT_48963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
ResIII
DEAD
Helicase_C
PAZ
AAA_22
Motif
Other DBs
NCBI-GeneID:
8848592
NCBI-ProteinID:
XP_002677410
JGI:
Naegr1_48963
UniProt:
D2VEU9
LinkDB
All DBs
AA seq
1214 aa
AA seq
DB search
MLSQPSLSTQTGDNTNDSNNNTIITIEKPRAYQLELLRESIDGNSICILPTGTGKTLLAC
LLIDQLLHQNDKKEYMGDEYFLSSKCSCCISDQKKPPTNGPPDKKKLTKKIFFLVPTTAL
RKQQQEAIFKYFYKRECSKMKIKKDFTIDSSKSWNVIVSTPQILLNALQSQIISFEDILL
LVFDEAHHATKDHPYVKLMRDYYHNNKPIDPSLLAYNFNFLKDRQPIELPKILGLTATPA
SQSLYKTSLNEHTLFLRKAKLEFSLDASIKVPYDYMEEMKKHVNNPRQHSVAYSSKSELI
EPLNALKTFHSYHNFRDISVDDIEKNYRELGLIGSLIIISLICELDVFESFKSFYPIFNL
NQPIEFSSMNEINSSPFISDKVKILFDLVDTYENTNENMRCIIFAERIVHVKAIVKMFRM
YRKFIPLNCKELIGSSVMSRQAQATVVKEFSHTTRLLVATKAGEEGLNISKCSLVVQFDI
CNTTREHIQSMGRARHELSRYVVLYDKDDYSQIIMLTNMGNNERSIIVDTALEELKEYIK
SEKVIITNDTQEDIEPLISSIENLSDDEEIEKKDTYIPKPIRYEGPKDNNNVKLFVSQMI
INSNGKEEMTALLTFGEIQYPFEVTMHPLWLKLFPCGFITVTKSEYEKLIAFYMRLCRII
YNNYALKDYFYGDGRFYLVLPSCRGNQPRDVIDWNVIYTFEKELSQSEKDYPQSMTILDH
LRLGVRVPIDYFIVTTYNKDFYAPNYIDESSTPLESFEKQGSTITYQSYLKDRYEIMCDS
NQPMLSAYSLKYHRYVMLIPEFCKPTSLRIDFIESLRAVFKTSNEGTLMSLVEQTLVAHD
LKNQMFPSCGYINLSELRNAITHRTSQNLDTNYERYEFFGDTILKYAVVLDIVLRFPFEN
MKFYNEEKTAKVSNSNLRKLAQKLSIMDFFIETQYYHHNVAGIAFSKSEQEASVKGKKVR
ADIIESLIGLVGKHSIEEGVKLARDLKLVKKQNFIADKFILNSNPEYVKRIIENTIPDIE
KNAKELERIIGYKFKNILYAYYTLIHPSVDIGFNVNYETLEFVGDAVLDLYVSRTMFHNF
YLDQSEMHTFRSNFVRNTALEKIAKDFRIDQLLFVKKDLKLKAKSISDVMEALIGAVALD
SNLDWDKITDLMELSIFSPKLRDWLEGIETYENEKLLKSPKQELNKVINIKVRLKKYKNK
DMFKFCLPVDPLLA
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgctttctcaaccatcactgtcgacacaaacaggtgataatactaatgattcgaataat
aatacaattattaccattgaaaaaccgagagcctatcaattggaattgcttcgggaatca
atcgatggaaactcaatttgtattctaccaacaggtacaggaaaaacacttctagcctgt
cttttaattgatcaattattacatcaaaatgataaaaaggaatatatgggagatgaatac
tttttatcctcaaagtgttcatgttgcatttctgatcagaagaaaccaccaactaatgga
ccacctgataagaagaaactaacaaagaagatattcttcttggttccaacgactgcattg
aggaaacaacaacaggaggctattttcaaatatttctacaaaagggaatgtagcaaaatg
aaaattaagaaggactttacaattgattcgagcaaatcttggaatgttattgtgagcact
cctcaaatattgttgaatgctcttcagagtcaaataatttcttttgaagatatcttgtta
ttggtttttgatgaggctcaccatgctactaaggatcatccctatgttaaattgatgaga
gattattatcacaacaacaagcctattgatccttcactattagcatataatttcaatttc
cttaaagatagacaaccaattgagcttcctaaaattttaggtcttactgcgacaccggct
tctcaatctctctacaagacaagtcttaatgaacataccttatttttgagaaaggccaaa
ttagaatttagccttgatgcttccatcaaagtaccttatgattacatggaagagatgaaa
aaacatgtcaacaacccgagacaacatagcgtagcttattcatctaagagtgagttgata
gagccattgaatgcattgaaaacgtttcattcatatcataattttagagatatatcagtt
gatgatatagagaagaattatcgtgaattaggtttgattggaagtcttataattatttca
ctaatatgtgagttggatgtttttgagtctttcaaatcattttatccaatttttaacttg
aatcaaccaattgagttttcaagtatgaatgaaattaattcttcacctttcatttcagat
aaggtcaaaattctatttgatttagtcgatacatatgaaaatacaaacgaaaatatgaga
tgtatcatatttgctgagcgaattgttcatgtaaaggcaattgtaaaaatgtttagaatg
tatagaaagtttatacctctaaattgtaaagagttgataggaagttcagttatgtctcga
caagctcaagcaactgtagtgaaggaattttcacacactactcgacttctcgtagctaca
aaagccggagaagagggtctgaacatttccaaatgctctttagtggttcaatttgatatt
tgcaacacaactagagaacatatccagtctatgggtagagcgaggcacgaactttcaaga
tatgtagtactttatgataaggatgattattcccaaatcatcatgttaaccaatatgggt
aacaatgagcgaagcatcattgtagatactgccttggaggagctaaaagaatatattaaa
tctgagaaggttattattacaaatgatacacaagaggatattgaaccactcatttcttca
atagagaatctttcagatgacgaagagatagagaagaaagatacatacattccaaagcca
attagatatgaggggcctaaagacaacaataatgtcaaattatttgttagtcaaatgata
atcaatagcaacggaaaggaagaaatgactgctcttttgacttttggagagattcaatat
ccgtttgaagtgactatgcatcctttatggctgaaacttttcccttgtggattcataaca
gtaaccaagtctgaatatgaaaaattgattgcattttacatgagattatgtagaattatt
tacaataattatgctcttaaagattatttttatggagatggaagattctacttggtactt
ccttcttgtagaggaaaccaaccaagggatgtcatagattggaatgtgatatatacattc
gaaaaagagttatcccagagtgagaaagattatccccagtcaatgactatattagatcat
ttgagattaggagtgagggtaccgatcgattattttattgtaaccacatataataaggat
ttttatgctccaaattatattgatgagagttctacacccttagaatcttttgagaaacaa
ggatctactataacttaccaaagctatttgaaggatagatatgaaattatgtgtgattca
aatcaaccaatgttatctgcatattctctcaagtaccacagatatgtcatgttgatacca
gaattctgcaaaccaactagtttaaggatagattttatcgaatccctaagagcagtattt
aagacgtccaatgaaggaacattgatgagtttagtagagcagacccttgtagcccacgat
ttgaaaaatcaaatgtttccaagttgtggttatattaacttgtcagagttaagaaatgca
ataacgcacagaactagtcagaatctggatactaactatgaaagatacgaattttttggt
gatactatattgaaatatgctgttgttttggatatagttctgagatttccattcgagaat
atgaaattttataatgaggaaaagactgccaaagtttcaaactccaatttgaggaagttg
gcccaaaaattatctattatggacttctttatcgaaactcagtactatcatcacaatgtg
gctggtattgctttctctaaaagcgaacaggaagcttctgtgaaaggcaaaaaagtacgt
gctgatataattgaaagtttaattggtctcgttggtaaacacagtattgaagaaggtgta
aaattggctagagatttgaaactggtcaaaaagcagaattttattgctgacaaatttata
ttgaattcaaatccagaatatgtcaagcgtatcattgaaaacacaataccagacattgag
aaaaatgctaaagaattggaacgaattattggatacaaattcaaaaatattctatatgca
tactacacattaattcacccctctgttgatattggttttaatgtgaattatgaaactctg
gaattcgttggcgatgctgtcttggatttatatgtttctcgaacaatgttccataatttt
tatctggaccagagtgaaatgcacacgttccgttccaattttgtaagaaatacagcattg
gaaaagatagccaaagactttagaattgatcaactgttgtttgtaaagaaagatctgaaa
cttaaagccaaatctatttcagatgtgatggaggcattgattggtgctgttgctctcgac
tctaatcttgattgggataagattactgatctgatggagttaagcatattctcacctaaa
ttacgtgactggcttgaaggtattgaaacctatgaaaatgaaaaactactcaaatcacca
aaacaagaattgaataaggtgattaatatcaaagttagattgaagaaatacaaaaataag
gatatgtttaaattttgcctaccagtggatccattattggcttga
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integrated database retrieval system
