Naegleria gruberi: NAEGRDRAFT_50018
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Entry
NAEGRDRAFT_50018 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_50018
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_50018
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NAEGRDRAFT_50018
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
NAEGRDRAFT_50018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
HTH_44
YqgF
HHH_9
Tex_central_region
Tex_YqgF
Spt6_S1
DIX
Motif
Other DBs
NCBI-GeneID:
8852067
NCBI-ProteinID:
XP_002675755
JGI:
Naegr1_50018
UniProt:
D2VJC0
LinkDB
All DBs
AA seq
1296 aa
AA seq
DB search
MSSKDYIEEEAELDDEEVAEQPTRDDDEDSEEEEENEDLDKFEKDGFIVDDDEEDDNVPP
PYIDPFDQGEQTLKRKANPSKKKRKFKRLKKGDLLSKEVDDLREPEHFDDDDDGDESDFI
DRDDDDVDIFGSGDEDDMYDDMYPEEDDYERKVTLKDIYGPDLLVEKFLTDEDERIRNED
VPERILLRQGIRQIEQEELYNEACWIYTQVFQSEAELSIDKYSGLEGDRYNSLKNLFVET
IIKVLRFILQLRYDIPYIAQYKKEDFEHILYKDSFGNDRDLWKIFEWDEKWCILQSKKSK
LKLLYDNAKSVIPTEYLAYFEGSETLDEINDYHLHFTTVLNEESENQLTTLKRPTKRDLY
TMAKKEGLAILASQMSLSSYQYAENLESTFQIVETQDHALDPASAAEVFKTRTFESIESV
LGGARHICAFQIAHEPKIRQLVRRCFENNSTIKVKLTKKGKSVEGSDIISLLEDGRTMFT
KFRDEWAAHVRYAHDNKESFLKLLKYENLGLIKVSLFLEDRHFDGLLKADVLYLSQKHSQ
IATLWNEQRIKIIEEAKGILNKTIQHSVKTILRNKAADFVSDLCESNLTKMLFEESPYGN
NPRAKFDYDEFFEDEKPRPTKYKILSCVPGGEEGEKTTWVMLDENGTMIDKKVWPIGHPH
TTGNTSDSDRQLIDSMVKSVNDMIASHQPSVVALAACGGLIFKKMKEAFERTKQGGTIFN
INYEIVPDDIARIYENSSRATNEYPQENNVVRRAISVGRRLRDPLTEICGLFNNEELLCY
KFHELQDMVPKEQLVKSLEKSLVRVVNRVGVEINRIVLFPQLQPTLRFLSGLGPRKAELL
INKIKQEDSVSDRESINNILNEQRNVALNSIGFLIVRRPPTIAARDSMARAFKVIDATRV
HLLSYPLAKKMAEDGLETENLKTEKIHKIFKKPQALDELDLDAYADELEKRNYGKTHITL
KDIKEELKYPFKDPRYEFKSINNDDEKVFELVTHETKKSLAPGQQVFATVVTVGERIIFC
KLDNGLYGVIALYNRNVSLREGEERYFEIERVEYKQFKVHLVPPKEDIYAPKAESIMDQH
RKSAPSKKRFHRQIDHPQFKDFDYSQAVAFLADKGPGELVIRPSSKGYDHLAITFKFSTN
LYINYDIEEEKKGKDINSLGSTLKVNGKIFSDLDEVIFYCVESLMEYSNQLMSSSKYFNG
NRDELKVHLREEKKKNPSVIPYKIVMSTSKAARFYFFYLPGRHTLQEKSFTVTPDGYYFA
GRQFKDTVKLINAFKKLCQSDASNRVQPSHQGGQWE
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaggattacattgaagaggaagccgagttggatgatgaggaagttgctgaa
caaccaacccgagatgatgatgaagatagtgaggaagaggaagaaaatgaagatcttgat
aaatttgaaaaggatggttttatcgtagatgatgatgaggaagatgataatgtacctcca
ccatatattgatccttttgatcaaggagaacaaacattaaagagaaaagctaatccttct
aaaaagaaaagaaagtttaaaagacttaaaaaaggagatcttttatcaaaagaagttgat
gatcttcgtgaacctgaacattttgatgatgatgatgatggagatgaatccgattttatt
gatagagacgatgatgatgtagatatcttcggttcgggagatgaggatgacatgtatgat
gatatgtatcctgaagaagatgattatgaaagaaaagttactttgaaggatatttatggt
cctgatttgctagtcgaaaagttcttgactgatgaagacgaaagaattagaaatgaagat
gtccctgaaagaattttattaagacaaggaattagacaaattgaacaagaagaattatat
aatgaagcttgttggatttatactcaagtttttcaatctgaagccgaacttagtattgac
aaatattctggattagaaggagatagatataattctcttaaaaatttatttgttgaaact
attattaaggtcttaagatttattttgcaactaagatatgatattccatatattgcacaa
tataagaaagaggactttgaacatattttatataaggatagttttggaaatgatagagat
ttatggaaaatatttgaatgggacgagaagtggtgtattcttcaatcaaagaagagtaaa
ctcaagctcttgtatgataatgcaaagtcagtcatacctaccgaatatttggcatatttt
gaaggaagtgaaactttggatgagattaacgactatcatcttcattttactactgttctc
aatgaagaatcagaaaatcaacttactaccctaaagagacctactaagagagatttatat
actatggctaagaaagagggtttggcaattttagcatcacaaatgtctctttcatcatat
caatatgctgaaaatttagaaagtactttccaaattgttgaaacccaagatcatgcactt
gatcctgcttctgctgctgaagtttttaaaactagaacttttgaaagtattgaaagtgtt
ttggggggtgcaagacatatttgtgcattccaaattgctcatgaacctaagatcagacag
ctagttcgtcgttgctttgaaaataattctactatcaaagtgaaattgaccaagaagggt
aaatctgttgaaggctcggatattatttctctcttagaagatggtagaaccatgtttacc
aagttcagagatgaatgggctgctcacgtcagatatgctcatgacaataaggaaagcttc
cttaaattattgaagtacgaaaatctaggtcttatcaaggtatctttattcttagaagat
agacactttgatgggttgttaaaagcagatgtgctttatttgagccaaaagcactctcaa
attgcaactttatggaatgaacaaagaattaagattattgaagaagcaaagggtattttg
aacaaaactattcaacattctgtaaaaactattcttagaaataaggctgcagactttgtt
tctgatttgtgtgaatccaatttaacaaagatgttgtttgaagagagtccttatggtaat
aacccaagagctaagtttgattatgacgaattctttgaagatgaaaagccaagaccaacc
aaatacaaaatcctcagttgtgttcctggtggtgaagaaggcgaaaagacaacttgggtt
atgcttgatgaaaatggtactatgattgataagaaagtttggccaattggccatcctcac
acaactggtaatactagcgattctgacaggcaactgatcgactctatggtcaagagtgta
aatgatatgatcgcatctcatcaaccatctgttgttgctttggctgcatgtggaggtttg
attttcaagaaaatgaaagaagcctttgaacgtacaaaacaaggaggtacaatcttcaac
attaactatgaaatcgttcctgatgatattgcaagaatctatgaaaattcatcaagagct
acaaatgaatatccacaagaaaataacgtagttagaagagctatttctgttggtagaaga
ttgagagatccattgacagaaatttgtggactttttaataacgaagaactcctttgttac
aagttccatgagcttcaagatatggttccaaaagaacaacttgtaaagtcacttgaaaag
tctcttgttagagttgttaaccgtgttggtgtagaaattaatagaattgtcttgttccct
caattacaaccaactttgagattcctcagtggtttgggtccaagaaaggcagaactctta
attaataagatcaaacaagaagatagcgtctctgacagagaatctattaacaatatcctg
aacgaacaacgaaatgttgctttgaacagtattggtttcttgattgtaagaagaccacca
actattgctgccagagactctatggccagagctttcaaggttatcgatgctaccagagtt
cacttattgtcttatcctcttgctaagaaaatggctgaagatggtctggaaactgaaaat
ttaaagactgaaaagattcacaaaatcttcaaaaagcctcaagcattggacgaattagat
ttggatgcctatgctgacgaactcgaaaagagaaattatggtaagactcatattactttg
aaggatatcaaggaagaacttaaatatccattcaaagaccctagatatgaattcaagagt
atcaacaatgatgacgagaaggtattcgaacttgtgactcatgaaactaaaaagtctttg
gcacctggtcaacaagtgtttgctacagttgtaaccgttggcgaaagaatcatattttgt
aaattagataatggtctttatggtgttattgcattgtataaccgaaatgtctctctaagg
gaaggagaagaaagatactttgaaattgaaagagttgaatacaagcaattcaaagtacat
cttgtacctccaaaagaagatatctatgcaccaaaggcagaatctattatggatcaacac
cgtaaatcagccccttcaaagaagagattccacagacaaattgaccatccacaatttaaa
gactttgattattctcaagctgttgccttcttagctgataagggtcctggtgaattagtc
attcgaccaagtagtaagggatatgaccatttagctatcacatttaaatttagcactaat
ctttatatcaactatgatattgaagaagaaaagaaaggaaaggatatcaattcacttggt
agtacccttaaagttaatggaaagatatttagtgacttggatgaagttatcttttattgt
gttgaaagtttaatggaatattcaaatcaattaatgtccagtagcaagtattttaatggt
aacagagatgaattgaaggttcatttgagagaagaaaagaaaaagaatccaagtgttatc
ccatataagattgtcatgagtacttccaaagcagcaaggttctatttcttctatcttcct
ggaagacatacactccaagaaaaatcattcaccgttacacctgatggttattactttgct
ggaagacaattcaaagatactgtaaagttaattaatgcattcaagaaattatgtcaatct
gatgcatctaaccgagttcaaccaagtcaccaaggtggacaatgggaataa
DBGET
integrated database retrieval system
