KEGG   Naegleria gruberi: NAEGRDRAFT_52042
Entry
NAEGRDRAFT_52042  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
ngr  Naegleria gruberi
Pathway
ngr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NAEGRDRAFT_52042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngr03021]
    NAEGRDRAFT_52042
Transcription machinery [BR:ngr03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     NAEGRDRAFT_52042
SSDB
Motif
Pfam: RPC5 UBA_8
Other DBs
NCBI-GeneID: 8854241
NCBI-ProteinID: XP_002672765
JGI: Naegr1_52042
UniProt: D2VT48
LinkDB
AA seq 660 aa
MLNNNNGEGDSSMPNVTSSSSDSRADMMMTQEDEGVDIGEIAKKFNPAQDGDVEMGEASS
SSSDGDEVVKRFEVYLSHKLSDKLYLLQYPLRPKNNNYNFQQLKEVRFKPNHNKMEMDFE
VNTRSEHYNTDSGQEYSTFSLSSTSVPVKANYAVGILRGNQLHLTPLWNMLQLRPGFQHI
NDGYSTGKSKVVRKKKGEEGEENGDKKNEAVPNASQGGGMNFRLQSDRKALERSYQFMKD
QENNEKSINLALYSPQDSRQHIESLFEQRDDPVRFNVPPTAYLKQLVQYREEDQSAMAQG
SLGAIKKIKLGERQVYYALYLAKILPFSKIRELSTRIKSDEEMLNALQRYGVFVDGRWVL
KSEFNEKIIKLKDLDKNPWTCLKYPKTAAFREYLLYLFQTEKKVIRKKFVEKTGIEADRA
KQLLEEVAVLKKVSQDADEDDELAAYWVLKYDVDQEFIDEFRSFAGLTVKQMWTKRELEI
NNLTNSNFRDLSILLHDVPKSNARGVGGATPNRFVASVESELKLFITNTLLENGVCSDVL
LKKKKNENPSKYINNAKEEDFLKILDEVSIEFNNARIMKYRSDYSEKENKYREAIVKAFK
ENKYCLSKPNVKEVIKNAFNEDIPQNSFVRIMVELAINDATNKWHAKTGTEALKPSNTTV
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgttgaacaataataatggagagggtgatagttccatgcctaatgtaacatcatcatca
tcggattcgagagctgatatgatgatgacacaggaggatgaaggtgttgatattggagaa
attgcaaagaaatttaatccagcacaggatggtgatgtagaaatgggagaagcctcttcg
tcatcttccgatggtgatgaagttgtaaagagatttgaagtttatttatcacataaattg
tctgataaactttacttgctacaatatccacttcgtccaaagaataataattataatttt
caacaattgaaggaagttagatttaaaccgaatcacaacaagatggaaatggattttgaa
gtgaatacaagaagcgaacattataatacagattctggtcaagaatattctacattttcc
ctttcatcaactagtgttcctgtcaaggcaaattatgctgttggtattcttagaggaaat
caattgcatcttactcctttgtggaacatgttacaattacgtcctggtttccaacatatt
aatgatggttattcaactggaaagagtaaagttgtaagaaaaaagaagggagaagaagga
gaggaaaatggtgataaaaagaatgaagctgtaccaaatgcttctcaaggaggtggtatg
aactttagattacaatcggatagaaaggcattggaaagatcatatcaatttatgaaggat
caagaaaataatgaaaaatccattaacttggctctctattcacctcaagactctagacaa
catattgaatcactctttgaacaaagagatgatcctgttagatttaatgtaccaccaact
gcctatcttaaacaattggttcaatatagagaagaagatcaatcagctatggctcaaggt
tctttgggagcaatcaagaaaatcaaattgggagaaagacaagtttactatgccttgtat
cttgctaaaattcttccattctcaaagattagagagctttcaacacgtataaagagtgat
gaagaaatgctcaatgctctccagcgatatggtgtatttgtggatggtagatgggttctc
aaatcagaattcaatgaaaagattatcaaattgaaagacttggataagaatccttggact
tgtcttaaatatccaaaaacagcagcctttagagaatatttactttacctcttccaaaca
gaaaagaaagttatcagaaaaaagtttgttgaaaagactggcattgaagctgatagggcc
aaacaattactcgaagaagttgctgtattaaagaaggtatctcaagacgcagatgaagat
gatgaattggctgcctactgggttcttaaatatgacgtggatcaagaattcattgacgag
tttagatcatttgctggtttgacagtcaagcaaatgtggacaaagagagaattggaaatt
aataacttgactaattctaactttagagatttatcaattctcttacatgatgttccaaaa
tcaaatgcaagaggtgtgggaggtgctacaccaaacagatttgttgcttctgtggaaagt
gaattgaaattgttcattaccaatacccttcttgaaaatggtgtctgtagtgatgtctta
ctcaagaagaagaagaatgaaaacccatctaagtacattaataatgctaaggaagaagat
ttcttaaaaattttggatgaagtttctattgaatttaataatgctagaattatgaagtac
agatctgattactcagagaaggaaaacaaatatagagaggccattgtaaaggcatttaaa
gagaacaaatattgtctttcaaagccaaacgttaaggaggtcattaagaatgctttcaat
gaagatattccacaaaacagttttgtaagaatcatggttgaattggccataaacgatgca
actaacaaatggcacgcaaaaacaggtactgaagctctcaaaccttccaatactactgta
taa

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