Naegleria gruberi: NAEGRDRAFT_52240
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Entry
NAEGRDRAFT_52240 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
ngr03015
mRNA surveillance pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_52240
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_52240
03015 mRNA surveillance pathway
NAEGRDRAFT_52240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_52240
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_52240
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
NAEGRDRAFT_52240
Spliceosome [BR:
ngr03041
]
Common components
Common spliceosomal components
Cap binding complex
NAEGRDRAFT_52240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
8860844
NCBI-ProteinID:
XP_002672553
JGI:
Naegr1_52240
UniProt:
D2VU00
LinkDB
All DBs
AA seq
117 aa
AA seq
DB search
MLNDKEGEKLLKRTIVVFELPFVAEEKQIREFFEKVSGGISSIDVIKANALVFSSAVIQF
NKEKGAEKAIELARHGVAVGQFDGIVCTAQDVIEGKKLSRTAPKEEGKANAGGCKNQ
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacgataaggaaggtgaaaaacttttgaaacgaacaattgtagtatttgaactg
cctttcgttgctgaagaaaaacaaattcgagaattctttgagaaagttagtggaggaatt
agttctattgatgtgatcaaagctaatgccctcgttttcagctctgctgtgatacaattt
aacaaggaaaagggagctgaaaaagctattgaattggctcgacatggtgtagctgttggt
caatttgatggaattgtttgtactgctcaggatgttattgaaggaaagaaactctctagg
acagcaccaaaggaagaaggaaaagcaaatgctggtggttgtaagaatcaataa
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