Naegleria gruberi: NAEGRDRAFT_53477
Help
Entry
NAEGRDRAFT_53477 CDS
T01241
Name
(RefSeq) histone deacetylase
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngr01009
]
NAEGRDRAFT_53477
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_53477
04131 Membrane trafficking [BR:
ngr04131
]
NAEGRDRAFT_53477
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_53477
Enzymes [BR:
ngr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
NAEGRDRAFT_53477
Protein phosphatases and associated proteins [BR:
ngr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
NAEGRDRAFT_53477
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
NAEGRDRAFT_53477
Membrane trafficking [BR:
ngr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NAEGRDRAFT_53477
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
NAEGRDRAFT_53477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
8857708
NCBI-ProteinID:
XP_002670521
JGI:
Naegr1_53477
UniProt:
D2VZE4
LinkDB
All DBs
AA seq
514 aa
AA seq
DB search
MLANDETTSSSSSTRTSQGNSPPATIKVRTEDGSLEGEFRVREIKSKKLPSFLSKKRKPT
SEQDENNSIGDVNKDQLEVNNMKKYKVDMQEIESYFNMDDCILHQECGRKCMVMDGSVNP
SISYIVTGTKRSNEIVEEIPFDPKMKRTVIMFDKRMGLHMGRGSHPESPARLSGIWSFAI
EEFHFDKGCTIIEGRKATREELEWTHSPHHVDAVMASHLEMFNFSTDVFVGEQSGDAARV
ASGGLIEIATKVMNGEFDNGFAIIRPPGHHCYFDKASGFCIVNNVAVAANVLVKRSLAKR
IVIVDWDVHHGNGTQAILEDQFKERFDNCNPNNDEKPEIIFFSLHQTKNNFYPKTGTLEQ
IAYEGAKKFIFNIPFDETYGDQEILNAFEQIIMPIASNYNPDIVLVSAGFDAVKGDKLGG
QLCSQQLFGHLTCMLKTLANGKIVLALEGGYNIQETAGCVKECVSVLCGQEPQGLSSLFQ
TMYLKEEQIEKHSNMMERVKQFYSAEFNKMDTNL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaatgatgagacaacttcttcttcgtcatccacaagaacaagtcaaggaaat
tctcctcctgctaccatcaaggtaaggactgaggacggctcgttggagggtgaatttagg
gtgagggaaattaaatctaaaaaacttccatcttttttgagcaagaagagaaaaccaact
tcggaacaggatgaaaataattctattggtgatgtaaataaggatcaattagaggtgaat
aatatgaaaaaatataaagtggacatgcaagaaattgagtcttatttcaatatggatgat
tgtattttacatcaggaatgtggaagaaaatgtatggttatggatggctctgtcaaccca
tcaatatcttatattgtgactggtacaaaaaggtcaaatgaaattgtggaggaaattccc
ttcgatcctaaaatgaaaagaactgtcattatgtttgataaaagaatgggattacatatg
ggaagaggttctcacccagagtcaccagctagattatctggaatttggagctttgccatt
gaggaatttcattttgataagggttgtacaataattgaaggtagaaaagcaacgagagag
gagttggagtggactcattcaccacatcatgtggacgctgtaatggcgtcacatttagaa
atgttcaatttctcaacagatgtatttgttggagagcaatcaggagatgcagcacgagtt
gccagtggaggacttatagagattgcaaccaaagtgatgaatggagagtttgacaatggc
tttgcaattattagacctccagggcatcattgctactttgataaggcaagtgggttttgt
atagtcaataatgtggctgttgctgcaaatgtgttggtgaagagatcattggctaaacga
atagtaattgtagattgggatgtacatcatggcaatggaacacaagcaatactggaagac
caatttaaggaacgtttcgataattgcaatccaaataatgatgaaaagccagagattatt
ttcttctctctgcatcaaacaaagaataatttctatccaaaaactggaacattagaacaa
attgcttacgagggagcaaagaaatttattttcaatattccattcgatgagacatatgga
gatcaagaaatactaaatgcattcgagcaaatcatcatgccaatagcgagtaactataat
ccagatattgttctcgtttcagctggctttgatgcagtaaaaggagacaaactgggtggt
caattatgttctcaacaattatttggtcacctaacatgcatgcttaaaacattggcaaat
ggaaagattgtattagctctcgaaggaggttataacattcaagaaactgcaggatgtgta
aaagaatgtgtttcagtgttgtgtggacaagaaccacagggtctctcctctctcttccaa
accatgtatctgaaagaggaacaaattgaaaaacattctaatatgatggaaagagtaaag
caattttactctgccgagttcaataaaatggataccaatctttaa
DBGET
integrated database retrieval system
