Naegleria gruberi: NAEGRDRAFT_53874
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Entry
NAEGRDRAFT_53874 CDS
T01241
Name
(RefSeq) RNA-directed RNA polymerase
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_53874
Enzymes [BR:
ngr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
NAEGRDRAFT_53874
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
NAEGRDRAFT_53874
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
RdRP_head
Motif
Other DBs
NCBI-GeneID:
8856956
NCBI-ProteinID:
XP_002670029
JGI:
Naegr1_53874
UniProt:
D2W125
LinkDB
All DBs
AA seq
663 aa
AA seq
DB search
MGDFTDIKTPAKVAARFGQCLTSTTPSIEITKDIEPVEDIERNGFTFTDGIGKISEEMMQ
RVKEKLQLGESLLSAIQFRCGGGKGVLAIDPTLKGEQIVFRKSQFKFTSIQKQLEIVDYS
KRRSGFLNRQFITILTALGIKDEIFMTKQREMIRSILSITDDVSKAYEWLSIYHSNHTRT
FICHVLKYVPEIATSENFIMNMLSSYKEQLLKGLRDKTKIYIEKSAYLMGAIDEYGVLEE
NEIFVNLSPIFHRPNAEFGVVKGRCIVGKNPSLHKGDLRIVTAVDRPELYHLNDVVVFSK
KGKRPITNMITGSDLDGDQFFVYWDPDLIPESDSEPMDYSVGAVAKPTNKKDEEEEEYKI
KQDDIIDFFIEFITRNNLGLIANTHLANSDFRKNGLTSKECLTLCELHSTAVDSAKSGKF
AIIPSKVKLYEYPHFMISSMKRKYKSKKVLGKLFDETQFKHETPGKCNKKHNSLLIVDGF
DKYLKEIEPHYYNYSRFVNSDMVKYGVEDESQIISGWINTNIKCFGHKEHDIHETIAITI
SFYLKHFRNVFEEMVRKYGESERLAIASAWYYITHTEKNQFNIFSFGWINFKELVMIATK
EKEIRVDSDEEIQNLEENSEGEYDENYNDDDDLYDLTGDESEVESTCSEVDSWTEGMDNS
YFY
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggagatttcactgacattaaaacacctgcaaaggttgcagcaagatttggacaatgc
ttaacaagtacaactccatcaattgaaattactaaagatattgaaccagttgaagatatt
gaaagaaatggattcacttttacagatggtattggaaagataagtgaagaaatgatgcaa
cgagtaaaggaaaagcttcaattaggagaatcattactatcagctattcaatttagatgt
ggaggaggaaagggagtattagcaatagatccaactttaaaaggagaacaaatagttttc
agaaagagtcaattcaaatttacctcaatacagaaacaattggaaattgtggattactca
aagaggagaagtggatttttgaatagacaattcataacaattttgacagcacttggaatt
aaggatgaaatattcatgacaaaacagagagaaatgatacgttccattcttagtataaca
gacgatgtctcaaaggcctatgaatggctgtcgatttaccattccaaccatacaaggaca
tttatttgccatgttcttaaatatgtaccagaaattgcaacatcagaaaattttatcatg
aatatgttgagttcatataaggaacaattattgaaaggattacgagacaagactaaaata
tatattgagaaatcagcgtatttaatgggagccattgatgagtatggagttttggaggaa
aatgaaatctttgttaatttatcacctatctttcatagacctaatgctgaatttggagta
gttaagggaagatgtattgttggaaagaacccttctctacataaaggtgatttgagaata
gtaacagcagtcgatcgtccagaactttaccatttaaatgatgttgtggtattttctaag
aaaggaaaaaggccaataacaaacatgataacaggctcagatcttgatggtgatcaattt
tttgtctattgggatccagacttgattcctgaatcagattctgaaccaatggactattca
gttggagctgtagccaaaccaacaaacaaaaaagacgaggaggaagaagaatacaagatt
aagcaagatgatattatagactttttcatagagtttattacgagaaataatcttggattg
attgccaatactcatttggctaattctgattttagaaaaaatggtttaacatcgaaggaa
tgtttaacactttgtgagcttcactcaacagctgtagacagtgccaagagtggtaaattt
gcaatcattccatcaaaggtcaaattatatgaatatccacactttatgatttcttctatg
aaaagaaagtacaagtctaaaaaagtgcttggaaaactatttgatgaaacacaattcaaa
catgaaacaccaggaaaatgcaacaaaaagcacaattcattactcattgttgacggattt
gacaagtacttgaaggaaatagagccacattattacaattacagtagatttgtcaactcg
gatatggtaaagtatggcgttgaggacgaatcacaaattatttcaggttggattaatacc
aatatcaaatgctttggacataaggaacatgatattcacgaaaccattgcaatcaccatt
tcattctacctgaaacattttaggaatgttttcgaagagatggtaaggaaatatggggag
agtgagcgattggcaattgcctctgcctggtattacattactcatacagagaaaaatcag
ttcaatattttcagttttgggtggataaactttaaggaactggtaatgattgctacgaaa
gagaaggaaattagagtggattcggatgaagaaattcaaaatcttgaagaaaatagtgaa
ggagaatatgatgagaattataatgatgatgatgacttgtatgacttgactggagatgaa
tcagaagtagaatcaacatgttcagaagtggattcatggacagaaggaatggataattct
tatttctattag
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