KEGG   Naegleria gruberi: NAEGRDRAFT_53975
Entry
NAEGRDRAFT_53975  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
ngr  Naegleria gruberi
Pathway
ngr03013  Nucleocytoplasmic transport
ngr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    NAEGRDRAFT_53975
   03015 mRNA surveillance pathway
    NAEGRDRAFT_53975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngr03019]
    NAEGRDRAFT_53975
   03041 Spliceosome [BR:ngr03041]
    NAEGRDRAFT_53975
Messenger RNA biogenesis [BR:ngr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     NAEGRDRAFT_53975
Spliceosome [BR:ngr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    NAEGRDRAFT_53975
SSDB
Motif
Pfam: PWI DUF5646
Other DBs
NCBI-GeneID: 8857164
NCBI-ProteinID: XP_002669839
JGI: Naegr1_53975
UniProt: D2W1I1
LinkDB
AA seq 398 aa
MRGTASLEQDVRFANKDKLLVQSTKFPKGFDIKVDISKVNLEVFTLWIHKTIEELTGTDD
DMIAEYANSLLMEKDCDPKQMQIQLAGFMTIDKSAIFMKELWKLLVEAQSTTSGVPEGLL
EIEMEIRKKQEEEQEKIGRKINEKIIPNQHGNNRYYSRNNNGRDYSNDNYSNNNNNRNYN
KQSYPKHNSESSSSTNSGERRGIESFKSYEDDKSERRFNKRSDNDNNNSGRNGSDYNNSS
RGSSTSSQISTNKPSSSYDSRGSSSNQSYRKDYSKDYSKRSYPSPTNNSSRYNDRSSGKS
SSYDDYYNSSDRQYYSSDRNRSPPRKHSKYSYNSRKPSSERSEPTPPPSSSDDSDSDGHN
YISSRRKSNENSTSETLRKKALESMSKSKSSSSQEEER
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgagaggaacagcttcgctggagcaagatgtccgatttgccaacaaggacaaacttctc
gttcaatcaacaaaatttcctaaaggcttcgatatcaaagtcgatataagcaaggtaaat
ctagaagtttttacattatggattcataaaacaattgaagaattgactggaacagatgat
gacatgattgctgaatatgcaaatagccttttgatggagaaggattgtgatccgaagcaa
atgcaaatacagttggctgggtttatgactattgataaatcggccatctttatgaaggag
ctgtggaaattactagttgaagcacaatccactacaagtggtgtaccagagggattgtta
gaaattgaaatggagattagaaagaaacaagaggaagaacaagagaaaatcggaagaaaa
atcaatgaaaagattattccaaatcaacacggcaataacagatattattctcgtaataat
aatggccgtgactattccaatgataattatagtaataataataataacagaaattacaac
aaacaatcctaccctaagcataattctgaatcttcatcatcaactaatagtggagaaaga
agaggaattgagtcttttaaatcctatgaagatgataaatcagagagaagatttaacaag
agaagtgacaatgataataataatagtggaagaaatggatctgattataacaacagtagc
agaggttcctctacaagtagccagatcagtacgaacaaaccatcctcttcctatgattct
agaggatcatcatctaatcaatcctacagaaaggactactctaaggactattcaaagaga
tcttatccaagccctaccaataacagcagcagatacaatgatcgttcctctggtaaatca
tcctcctatgatgattattataactcttccgaccgtcaatactattcatctgatagaaac
agatcaccaccaagaaagcactctaaatattcttacaactctaggaaaccatcatctgag
agatcagagccgacaccacctccttcatcatccgatgactctgactctgatggtcacaat
tatattagttcaagaagaaaatccaatgaaaattccacttcggaaacactgagaaagaaa
gctctcgagtccatgtccaagagtaaatcatcatccagtcaagaagaagaacgataa

DBGET integrated database retrieval system