Naegleria gruberi: NAEGRDRAFT_53975
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Entry
NAEGRDRAFT_53975 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
ngr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_53975
03015 mRNA surveillance pathway
NAEGRDRAFT_53975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_53975
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_53975
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NAEGRDRAFT_53975
Spliceosome [BR:
ngr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
NAEGRDRAFT_53975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
DUF5646
Motif
Other DBs
NCBI-GeneID:
8857164
NCBI-ProteinID:
XP_002669839
JGI:
Naegr1_53975
UniProt:
D2W1I1
LinkDB
All DBs
AA seq
398 aa
AA seq
DB search
MRGTASLEQDVRFANKDKLLVQSTKFPKGFDIKVDISKVNLEVFTLWIHKTIEELTGTDD
DMIAEYANSLLMEKDCDPKQMQIQLAGFMTIDKSAIFMKELWKLLVEAQSTTSGVPEGLL
EIEMEIRKKQEEEQEKIGRKINEKIIPNQHGNNRYYSRNNNGRDYSNDNYSNNNNNRNYN
KQSYPKHNSESSSSTNSGERRGIESFKSYEDDKSERRFNKRSDNDNNNSGRNGSDYNNSS
RGSSTSSQISTNKPSSSYDSRGSSSNQSYRKDYSKDYSKRSYPSPTNNSSRYNDRSSGKS
SSYDDYYNSSDRQYYSSDRNRSPPRKHSKYSYNSRKPSSERSEPTPPPSSSDDSDSDGHN
YISSRRKSNENSTSETLRKKALESMSKSKSSSSQEEER
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaacagcttcgctggagcaagatgtccgatttgccaacaaggacaaacttctc
gttcaatcaacaaaatttcctaaaggcttcgatatcaaagtcgatataagcaaggtaaat
ctagaagtttttacattatggattcataaaacaattgaagaattgactggaacagatgat
gacatgattgctgaatatgcaaatagccttttgatggagaaggattgtgatccgaagcaa
atgcaaatacagttggctgggtttatgactattgataaatcggccatctttatgaaggag
ctgtggaaattactagttgaagcacaatccactacaagtggtgtaccagagggattgtta
gaaattgaaatggagattagaaagaaacaagaggaagaacaagagaaaatcggaagaaaa
atcaatgaaaagattattccaaatcaacacggcaataacagatattattctcgtaataat
aatggccgtgactattccaatgataattatagtaataataataataacagaaattacaac
aaacaatcctaccctaagcataattctgaatcttcatcatcaactaatagtggagaaaga
agaggaattgagtcttttaaatcctatgaagatgataaatcagagagaagatttaacaag
agaagtgacaatgataataataatagtggaagaaatggatctgattataacaacagtagc
agaggttcctctacaagtagccagatcagtacgaacaaaccatcctcttcctatgattct
agaggatcatcatctaatcaatcctacagaaaggactactctaaggactattcaaagaga
tcttatccaagccctaccaataacagcagcagatacaatgatcgttcctctggtaaatca
tcctcctatgatgattattataactcttccgaccgtcaatactattcatctgatagaaac
agatcaccaccaagaaagcactctaaatattcttacaactctaggaaaccatcatctgag
agatcagagccgacaccacctccttcatcatccgatgactctgactctgatggtcacaat
tatattagttcaagaagaaaatccaatgaaaattccacttcggaaacactgagaaagaaa
gctctcgagtccatgtccaagagtaaatcatcatccagtcaagaagaagaacgataa
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integrated database retrieval system