Naegleria gruberi: NAEGRDRAFT_54297
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Entry
NAEGRDRAFT_54297 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
ngr03015
mRNA surveillance pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_54297
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_54297
03015 mRNA surveillance pathway
NAEGRDRAFT_54297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_54297
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_54297
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
NAEGRDRAFT_54297
Spliceosome [BR:
ngr03041
]
Common components
Common spliceosomal components
Cap binding complex
NAEGRDRAFT_54297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
8859907
NCBI-ProteinID:
XP_002669370
JGI:
Naegr1_54297
UniProt:
D2W2X9
LinkDB
All DBs
AA seq
358 aa
AA seq
DB search
MAHLLEAHHPLKFFHGSKREYEYLLKHYVNEGGNEEDFERALSQSSTIYVENLSFYTKEE
QIYELFEKCGEVKRVVMGLNRNTLTPCGFCFVEFYHRSDAEECVKYCRGCKLNNRALKIA
IDTGFVEGRQYGRGKDGGMKRDDYIKMLKKRGPRGGREPRGGGSMSGRRSYDNDRDSSRS
SSYNNDYHRGGNNGSDHHRHSDNYSPPSPPFRDDRDRYGSSSSRPSSPYRNPRSTRDYHY
SNNNNNRYQPYPPPQNNSPHYGRVDSRNNSSSYYGPTSSYGRVSDNSNQIEIPPPRSYNN
NNNRGGAYYDRHQSYGNYSDRPSYGRTTNDSNKNNNQGSSRNEFESRPRDSRDYGPRH
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcttctcgaagctcatcatcctttaaaattttttcacggaagcaagagagaa
tatgaatatttattaaaacactatgtaaatgagggcggaaatgaagaggatttcgagagg
gcactttctcaatcttcaacaatctatgtagaaaatctaagtttttataccaaggaggag
caaatatacgaattgtttgaaaaatgtggagaagttaagcgagttgtaatgggtttaaat
agaaatacgttaacaccttgtggattttgttttgttgagttctatcacagatccgatgca
gaggaatgcgttaaatattgtagaggatgtaaattaaataatcgtgctcttaaaattgcc
atcgatacaggtttcgtagaagggagacaatacggaagaggaaaagatggtggtatgaag
agagatgattatataaagatgctaaagaaacgaggaccaagaggtggaagagaaccaaga
ggaggaggttcaatgtctggtagaagatcttatgataatgatcgtgatagtagcagatca
tcatcctataataatgactatcatcgtggaggaaacaatggatcagatcatcatcgtcac
tctgataattattctccaccttctcctccattccgagatgatcgagatcgatatggatcg
tcatcttctaggccatcatcaccatacagaaatccacgatcaactcgtgattatcactat
tccaacaataataataatagatatcaaccttaccctcctccacaaaataattcacctcac
tatggaagagttgattcaagaaataattcttcatcctattatggtccaacatcttcttat
ggtagagtgtctgataattcaaatcaaattgaaattccaccacctcgttcttacaataac
aacaacaatagaggaggagcatattatgacagacatcaatcttatggaaattattctgat
agaccttcatatggaagaacaaccaatgattcaaataagaacaacaatcaaggatcatct
cgtaatgagtttgaatctcgtcctagagacagtagagactacggtccaagacactaa
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