Naegleria gruberi: NAEGRDRAFT_5569
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Entry
NAEGRDRAFT_5569 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ngr
Naegleria gruberi
Pathway
ngr03018
RNA degradation
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_5569
09123 Folding, sorting and degradation
03018 RNA degradation
NAEGRDRAFT_5569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_5569
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_5569
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NAEGRDRAFT_5569
mRNA degradation factors
5'-3' decay
Lsm complex
NAEGRDRAFT_5569
Spliceosome [BR:
ngr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
NAEGRDRAFT_5569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
8849517
NCBI-ProteinID:
XP_002683245
JGI:
Naegr1_5569
UniProt:
D2UYM8
LinkDB
All DBs
AA seq
103 aa
AA seq
DB search
RKPRENILDLNQYISKQVLVKFIGGREVYGTLRGFDNMINLVLEDCYEFIRDLQDHHNRQ
TDENNKQYVRKLGIVICRGTSLMHLCPVDGTEEIENPFEDNED
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
agaaaacctagagaaaatattttagacttgaatcaatatatttctaaacaagttttggtt
aaatttatcggaggtagagaagtttatggtacactgagaggatttgataatatgattaat
ttggttttggaagattgctatgaatttattagagatttacaagatcatcacaatagacaa
accgatgaaaataacaaacaatatgtaagaaagctaggaattgtaatttgtagaggtacc
tcactgatgcatttgtgtcctgtcgatggtacagaagaaattgaaaacccttttgaagat
aatgaagat
DBGET
integrated database retrieval system