Naegleria gruberi: NAEGRDRAFT_56300
Help
Entry
NAEGRDRAFT_56300 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ngr
Naegleria gruberi
Pathway
ngr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NAEGRDRAFT_56300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_56300
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_56300
04131 Membrane trafficking [BR:
ngr04131
]
NAEGRDRAFT_56300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngr04147
]
NAEGRDRAFT_56300
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NAEGRDRAFT_56300
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NAEGRDRAFT_56300
Membrane trafficking [BR:
ngr04131
]
SNARE
SNARE associated proteins
Others
NAEGRDRAFT_56300
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NAEGRDRAFT_56300
Exosome [BR:
ngr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NAEGRDRAFT_56300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_33
AAA_16
AAA_5
AAA_14
AAA_2
AAA_22
TIP49
nSTAND3
AAA_28
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_17
Parvo_NS1
ATPase_2
Viral_helicase1
AAA_18
NB-ARC
AAA_7
IstB_IS21
ABC_tran
ResIII
TsaE
NACHT
Zeta_toxin
Bac_DnaA
DUF815
AAA_lid_PRS2_C
AstA_C
Vps4_C
Rad17
Molydop_binding
Zot
Motif
Other DBs
NCBI-GeneID:
8854828
NCBI-ProteinID:
XP_002673062
JGI:
Naegr1_56300
UniProt:
D2VSC1
LinkDB
All DBs
AA seq
822 aa
AA seq
DB search
MSDEQEPTTPSTKRALERKKQHEELLAKVKSQKEKNRLIVDEATQDDNSIVGVHPDTMEA
LELFRGDTVRIVGKKHKDTIAIVLSDEECERGKIKMNKVMRKNLRIRLGDVIILKQCADV
KYGKRVHVLPIDDTVEGLTGDLFDIFLKPYFLEAYRPLRKGDLFNVRGGMRSVEFKVVET
DPDEYCIVAPDTVIHCEGDPVKREDEEARLNEVGYDDIGGVRKQLAQIREMVELPLRHPQ
LFKSIGIKPPRGILMYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESEANLRK
AFEEAEKNAPAIIFIDEIDSIAPKREKANGEVERRIVSQLLTLMDGLNSRSNVIVMAATN
RPNSIDEALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLDDDVDLEAVAKETHGYVG
ADLAQLSTEAAMNCIREKMDLIDLEEDTIDAAVLDSMGVTMDHFRAALTTQSPSSLRETV
VEVPNVSWADIGGLEKVKQELQELVQYPIEYPDMFAKFGQEASKGVLFYGPPGCGKTLLA
KAIANECQANFISVKGPELLTMWFGESEANVRNIFNKARAAAPCVLFFDELDSIAKARGG
SSGDAGGASDRVINQILTEMDGMGKKKNVFIIGATNRPDTIDPAVMRPGRLDQLIYIPLP
DEPSRMSILKASTRKSPLAQDVSLTAIAKATKGFSGADLTEICQRAAKLAIRESIQKEVD
FKRQKEEERKAKQMEDEDEDEEFGEEIDFVPYITRAHFEEAMRFARKSVPEHEIRKYEMF
STSLQQAAGDVRSFKFSDYDTADTTTASSTTADQVLDSDLYE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaacaagaaccaacaactccatcaactaagagagccttggaaagaaagaag
caacacgaagaattgttagctaaggtcaagtctcaaaaggaaaagaatagattgatcgtt
gatgaagccacccaagatgataacagtattgtaggtgttcaccctgacacaatggaagct
ctcgaattatttagaggtgatactgttagaattgttggtaagaaacacaaggatactatt
gctattgttttatctgatgaagaatgtgaaagaggtaaaatcaagatgaacaaggtcatg
agaaagaacttgcgtattagacttggtgatgttatcatcctcaagcaatgtgcagatgta
aaatatggtaaaagagttcacgtccttccaattgatgatactgttgaaggtttaactggt
gatctctttgatatcttcttgaagccatacttccttgaagcatatagaccacttagaaag
ggtgatttattcaatgttagaggtggtatgagatcagttgaattcaaagttgttgaaacc
gatccagatgaatattgtatagttgctccagatactgttattcactgtgaaggtgatcca
gttaagagagaagatgaagaagcaagattgaatgaagttggttatgatgatattggtggt
gttagaaagcaattagcccaaatcagagaaatggttgaattaccacttagacatccacaa
ctcttcaaatctattggtattaaaccaccaagaggtattttgatgtacggtccacctggt
tctggtaaaactttgattgctagagctgttgctaatgaaactggtgccttcttcttcttg
attaacggtccagaaattatgtcaaaacttgctggtgaatctgaagctaacttgagaaag
gctttcgaagaagctgaaaagaatgctcctgccattattttcattgatgaaattgattca
attgcaccaaagagagaaaaggctaatggtgaagttgaaagaagaattgtttctcaattg
ctcactcttatggatggtttgaattctagatctaatgttattgttatggctgctactaat
agaccaaactctattgatgaagctcttcgtagattcggtcgtttcgatagagaaattgat
attggtgttccagatgaaattggtagattggaagttttgagaattcacacaaagaatatg
aagttggatgatgatgttgatttggaagctgttgctaaagaaactcacggttatgttggt
gccgatcttgctcaattgagtactgaagctgctatgaattgtattagagaaaagatggat
ttgattgatttagaagaagatactattgatgctgctgttttagattctatgggtgttact
atggatcacttcagagctgctcttacaactcaatctccttcttcactcagagaaactgtt
gttgaagttccaaatgtatcttgggctgatattggtggtttggaaaaggttaaacaagaa
ttacaagaattagttcaatacccaattgaatatccagatatgtttgccaagtttggtcaa
gaagcctcaaagggtgtattgttctatggtccaccaggttgtggtaagactttgttagct
aaggctattgctaatgaatgtcaagctaactttatttcagttaagggtccagaattgttg
actatgtggttcggtgaatctgaagctaacgttagaaatattttcaataaggctagagct
gctgctccttgtgtcttgttctttgacgaattggattctattgctaaggccagaggtggt
agtagtggtgatgctggtggtgcttctgatcgtgttattaaccaaatccttactgaaatg
gatggtatgggtaagaagaagaatgttttcattattggtgctaccaatagacctgatact
atcgatcctgctgttatgagaccaggtcgtttggatcaattgatttacattccattgcca
gatgaaccatcaagaatgtcaattttgaaggcttctaccagaaagtcaccacttgctcaa
gatgttagtttgactgctattgctaaggctactaagggtttctctggtgctgatttgact
gaaatttgtcaacgtgctgccaagttagctatccgtgaatctattcaaaaggaagttgac
ttcaaaagacaaaaggaagaagaaagaaaggccaaacaaatggaagatgaagacgaagac
gaagaattcggtgaagaaattgactttgtaccatatattaccagagctcactttgaagaa
gctatgagatttgctcgtaaatctgttccagaacatgaaattagaaagtacgaaatgttc
tcaacatctttgcaacaagctgccggtgatgtcagaagcttcaagttctctgattatgat
actgctgataccacaactgcttcatcaacaactgctgatcaagtcctcgactctgatttg
tacgaataa
DBGET
integrated database retrieval system
