Naegleria gruberi: NAEGRDRAFT_56462
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Entry
NAEGRDRAFT_56462 CDS
T01241
Name
(RefSeq) RmlC-like cupin family protein
KO
K20353
COPII coat assembly protein SEC16
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngr04131
]
NAEGRDRAFT_56462
Membrane trafficking [BR:
ngr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
NAEGRDRAFT_56462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
8863932
NCBI-ProteinID:
XP_002683116
JGI:
Naegr1_56462
UniProt:
D2UXY2
LinkDB
All DBs
AA seq
1290 aa
AA seq
DB search
MSELFETSNQEDDLFGNSGEDFSSFLQQPLSKPIGQNTELVSEMHSISLSDTVVNHPTHI
EQENDQQENNDQIVPSYETVKEEKEEEPHTTLQDDGKEFNSEPVNNDLGFNGEDDLFGGS
TSNVQDFGSMILMQQTPPIVEPHIAPQEIVPPIVQTYLNQESAIQHPESTHPIISSPTIN
TSFPPNSVPTLNQSIIVNNSSGATSSTLSPPPLRSTNSTSSISSRNRYVNSFGTQSRSAF
TLPVSSPPSGTPTNINPQTPPMVNTERVVTSTPPYGNLSSSSVIPQYPPVVNAINSTLPQ
QVPTPTNDNHFANHYSNSQSMIPLNNRSAVMEGYSSSPPPFQGRQTPTQFATTTNGLVNN
PMINNGQMVNNSLMNPATVNNQNINHLNGNSMMSQSTMSNMGMNNGQMMNNYGMMNSTIN
NAHPTNFMPNNMNNSMNMMNHPHSNSPMMMNNPMNQYMNPMMMNNSMMQRSMSPNYQQNQ
IISRQILDQEIELRKTYPKPIFCFSFGGKIITSLPTINPHSQPSNSFVHQQRNQALYYQP
GLFKVQKLNQLINYRSSIIKSLEDYPITNISQQFDENNSNNINILLDQLVKYMNLKIYEK
QQALIQDNDEKCMGEKMLWDLVKIVSKYVNGNVNMVTSDINSLLTVLINNVPTELPINSE
NEQTSFNEAEHVVSIQNLLINGQIKQACQYAQTNKMWSHAILLSSMIDKQTYQQVVSTFA
KLTLNLGSPLRTLYCTFAGKPLEAFESNNSVNVDQYGNQYTLQTSQNEQQQLEKMSSQWL
QNLSIMFNNRQGATSQSVIEKIGDMLWKDCYQVPQSHFCYMIGDLSAIVSAFTIASNYQA
ATSNQSSKENIQQQSQQAMIAISNILSTSIVNKRVILLGGDNKRDLRHYINEETIQLSEI
FELLKAIITKNCLTAVQEQNTPPISMIINSSLLTYKLVYAYCLADFGFLEKANECCDYLI
EIVKRTQQSMKFNNYFKLHLQELKNRIIESNRLNNIVVPQRKPTSGAANNSGVTGWFMKG
LESIIHGGDSPTTPVESTTTLIQTNTINTNSMIPNNNIPSQQQPNYHNTIGQGIQANPIR
SSTPTNMISTQPSYQSSTQTPPPSTHTPQPPSYQATSIQTPPPSNNTPPPTSTPPVNQAI
NNTYAEEGSGVGGWFKSLWGGGSKASKKEANIGKKNEFYYDDIKKRWVRRGQENEVEAQV
QAPPPSLSAISSTTLQSAASQMRGGAGRYVNMFSGQQPTSNPPMMSNMPPPMMGNMPPSN
PMTGNMPPPSFGTMPSSNIMPPFFNPNTNN
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattatttgaaaccagcaatcaagaagatgatttgttcgggaacagtggtgag
gacttctcatcctttttgcaacaaccactttcgaaaccaataggacaaaacacggagttg
gtttctgaaatgcatagtatttctttatccgatactgtggttaaccacccaacacacatt
gaacaggagaatgaccaacaggaaaacaatgatcaaatcgtgccttcttatgaaactgtc
aaagaagaaaaagaagaagaaccccatactactcttcaagatgatggaaaagaatttaat
tccgaaccggtaaacaatgatttaggttttaatggtgaagacgatttattcggtggatca
accagcaatgtacaggattttggtagtatgatactaatgcaacaaacacctccgatagtt
gaaccacatattgcaccccaagaaattgttcctccaattgttcaaacttatttaaatcag
gagagtgccattcaacaccctgaaagtacccatcctataatttcatctccaactattaat
acatcttttcctccaaatagcgttccaacactcaatcaatccatcattgtaaacaatagt
agtggtgctacatcaagtactttgagcccacctcctttgcgttctacaaatagtacctct
tcaatttcttccagaaatagatatgtgaatagtttcggaacacaatccagatctgccttc
actttacctgtttctagcccaccaagtggtactccaacaaacatcaatcctcaaactcct
cctatggtgaatactgaaagagttgttacaagcactcccccatatggaaatttaagcagt
agttctgttattcctcaatatcctccagtggttaatgcaattaattcaacattgcctcaa
caagttccaactccaacaaatgataatcactttgcaaatcactattccaacagccaaagc
atgattccacttaacaatagatctgctgttatggaaggatactcttcatcacctccacct
ttccaaggtagacaaacaccaacccaatttgcaactacaactaatggattggtaaataac
ccaatgattaataatggacaaatggtgaataactcattgatgaatcctgctacagtgaac
aatcaaaatataaatcatttgaatggtaactcaatgatgagccaatcaactatgagtaat
atggggatgaataatggacaaatgatgaataattatggaatgatgaactctacaattaac
aatgctcatccaactaatttcatgcctaacaatatgaataattccatgaatatgatgaat
cacccacattccaacagcccaatgatgatgaataacccaatgaaccaatacatgaaccca
atgatgatgaataattcaatgatgcaaagatcaatgtctccaaattatcaacaaaatcaa
ataatatctagacaaattttagatcaagaaattgagttacgtaaaacatatccaaaacca
atattttgcttttcatttggtggaaagattattacatctttacctactattaatccacac
tcgcaaccatcaaacagctttgttcaccaacaaagaaatcaagctctatactatcaacca
ggattatttaaagtgcaaaaattgaatcaattaattaattataggtccagtattatcaaa
tcattggaggattatccaatcaccaatatttctcaacaatttgatgaaaataattcaaac
aacattaatattttgttggatcaattggttaaatatatgaacttgaaaatatatgaaaag
caacaagcccttatccaagataatgacgaaaagtgtatgggagaaaaaatgttatgggat
ttggttaaaattgtaagcaaatatgtaaatggcaatgtgaacatggtaactagtgatatt
aattcccttcttactgttctaattaataacgtaccaactgaattaccaattaattcagaa
aatgaacaaacctccttcaatgaggcggaacatgttgtcagtattcaaaatttgttaatc
aatggccaaatcaagcaagcttgtcaatatgcacaaaccaacaagatgtggtctcacgct
atacttttgagtagtatgattgataaacagacatatcaacaagtagtttccacttttgcc
aaattgactctcaacttgggtagcccacttcgtactctgtattgtacatttgctggaaag
cctttggaagcatttgaatcaaacaactctgtcaatgttgatcaatatggaaatcaatat
acattacaaacatctcaaaacgagcaacaacaattagagaaaatgtcctctcagtggcta
caaaatttatccataatgtttaataatagacaaggtgctaccagtcaatcagtaattgaa
aagataggagatatgttgtggaaggattgctatcaagtccctcagtctcacttttgttac
atgataggtgacttgagtgctattgtatcagcatttacgatagcatctaattatcaagct
gcaacttcaaatcaatcatccaaggaaaatattcagcaacaatcgcaacaagcaatgatt
gcaatttccaatattctctccactagtattgtaaataagagagtaattttattaggtggt
gataataagagagatcttagacattatattaacgaagaaacaattcaattgtcagagatt
tttgaattacttaaagcaattatcactaagaattgcttgacagctgtccaagaacaaaat
acccctccaatatcaatgattattaattcatcattgttaacctacaagttggtatatgca
tactgccttgctgattttggattcttggaaaaggcaaatgagtgctgtgattatttgatt
gaaattgtgaagagaactcagcaatctatgaagttcaataattatttcaaactccacctt
caagagctcaaaaatagaattattgaaagtaatagacttaacaatatagtagtacctcaa
aggaaaccaacctcaggtgcagctaataattcaggggtaacgggatggttcatgaagggt
ttagagagcataatccacggtggagatagtccaacaactccagtcgaaagtacaactacc
ctcattcaaaccaatacaatcaataccaactcaatgataccaaacaataatattccatcc
caacaacagcctaattatcacaataccattggccagggtattcaagcaaatccaattcgc
tcatctacaccaactaatatgatttctactcagccttcttatcaatcatctactcaaacc
ccaccaccctcaactcacacacctcaaccaccttcctatcaagcaacatctattcaaact
ccaccaccttccaataatactcctccaccaacctccacacctccagtcaaccaagcaatt
aataatacctatgctgaagaaggaagtggtgttggtggttggttcaagagtttgtgggga
ggaggaagtaaagcaagtaagaaagaagcaaacattggcaagaagaatgaattttattac
gatgacataaaaaagagatgggtaagaagaggtcaagagaacgaagttgaagcacaggtc
caagctcctccaccatctctctctgcaatctcttccacaaccctccaatctgctgcctca
caaatgagaggaggtgctggtagatatgtaaacatgttcagtggccaacaacccacaagt
aatccaccaatgatgtcaaatatgcctccaccaatgatgggaaatatgcctccaagtaac
ccaatgacgggaaatatgcctccaccttcctttggtacaatgccatcatctaatattatg
cctccattcttcaatcctaacaccaataattag
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