Naegleria gruberi: NAEGRDRAFT_56526
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Entry
NAEGRDRAFT_56526 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_56526
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_56526
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_56526
Spliceosome [BR:
ngr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NAEGRDRAFT_56526
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
Helicases
NAEGRDRAFT_56526
Pre-60S particles
NAEGRDRAFT_56526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_KNTC1_2nd
Motif
Other DBs
NCBI-GeneID:
8863837
NCBI-ProteinID:
XP_002683224
JGI:
Naegr1_56526
UniProt:
D2UYI2
LinkDB
All DBs
AA seq
590 aa
AA seq
DB search
MKRSNSEIKEKKKSTTTNNEKNTPSTSSSLVSEKKIIDNNNISSPPPSKKKKISKVSNPL
PTYEGYISQLDECINQQQALSHAISSHDGVIVPPQFSSSSQLAKLVHITNCNNIHASVKK
DLLNRDSEENVFLSLTQSVVFNEILGGKDLICEYCAVGSVFSKMDALFEDCSLSYLIPLV
TNVYKAVKFKRSGCLALILVDSDKKLERLRDDILVNNLPSAIEDDLISIVDGEEIEQTPI
VISTLKNIIPILKKQPDLFKISAKCVIFHLGEDTMTYSYGSSELFDQLKELNENYLPNKS
SRQTIFYSNSISSKTTAFVLKELTRANPPFIKLSDVIAEEAIIKQSIEMDKSKQEHSYLP
VKFPLKLVYLFSLLSFLVKYRKFQTVYIYFPSAEICEYYEVLFEHTKDFKAISKKSSMYF
VYDGMIDIPTSSDPSKTAVIHFEMPHDNSTYLQRIGNNRRSIALYTKGLSDDADVLFKEK
ADHLKLYDKFSNEAHCDLSIQFQCEKAVEKYNQIRDLLKAALKAYRSTHAKFLDNTSLQK
QQDKLKSLKHKKKLLNIEQFLQPFAVTDVNVTQQSWEYYCNILVPQNFDE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaagcaattctgaaattaaagagaaaaagaagtcaacaacaaccaacaatgaa
aagaatacaccatcaacatcatcatcattggtatcggaaaagaaaataatagataataat
aatatatcatcaccaccaccatcaaaaaagaagaaaatttcaaaagtttcaaatcctctt
cctacctatgaaggatacatttcgcaattggatgaatgtattaatcaacaacaggcactt
tctcatgccatttcttctcatgatggagttattgttccaccacaattttcatcttcatca
caattggcaaaattagtacacattaccaattgtaataatatacatgctagtgtaaagaag
gatttattaaatagagatagtgaggaaaatgtctttctttcccttacacaaagtgtagta
tttaatgaaattttaggaggaaaggatttaatttgtgaatattgtgctgtaggaagtgtg
ttttcaaagatggacgctttatttgaggattgttctctttcatatttaattccacttgtc
acgaacgtttacaaggctgttaaatttaagagaagtggttgtttggcattgattctagtt
gattctgataaaaaattagaaagacttagagatgatattttggttaataatttaccatca
gctattgaggatgatttgatttcaattgtagatggagaagaaattgaacagactccaatt
gttatttcaacattgaaaaacattattccaattttgaagaaacaacctgatttatttaag
attagcgccaaatgtgtaattttccacttgggagaggatacaatgacttattcatatgga
tcatctgaattatttgatcaattgaaagagttaaatgaaaattatcttccaaataagagt
agtagacaaactatcttttattccaattccatatcgagcaaaactacagcatttgtattg
aaagagctcactagggccaatccaccatttatcaaattgagtgatgttattgctgaagaa
gctattattaagcaatctattgaaatggataagagtaagcaagagcattcatatttgcct
gttaaattcccactcaaactagtttatttattttctctcctttcattcttggtcaagtat
agaaaattccaaacagtttacatttactttccaagtgctgaaatttgtgaatattatgaa
gtattatttgaacataccaaagactttaaagcaatctctaaaaaatcatcaatgtacttt
gtttatgatggtatgattgatattccaacttcatctgatccttccaaaacagctgtcatt
cattttgagatgccacatgacaattctacatatcttcaaagaattggtaataacagaaga
tctatagcattatatacaaagggtctatcagatgatgctgacgtattatttaaagaaaag
gctgaccatttgaaattatatgacaaattttcaaatgaggctcattgtgacttgtcgatt
caattccaatgtgaaaaagctgtggaaaagtacaatcaaattagagatttacttaaagct
gctctcaaggcctatcgctcaacacatgcaaaattcctcgataacaccagtttacaaaaa
caacaagacaaactcaaatccctcaaacacaaaaagaaactgttaaatattgaacaattc
ttacaaccatttgcagtaactgatgtgaacgtaacccaacaatcatgggaatattattgt
aacatcttggtgcctcaaaactttgatgaataa
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