Naegleria gruberi: NAEGRDRAFT_56631
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Entry
NAEGRDRAFT_56631 CDS
T01241
Name
(RefSeq) vacuolar protein sorting protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ngr
Naegleria gruberi
Pathway
ngr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
NAEGRDRAFT_56631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngr04131
]
NAEGRDRAFT_56631
Membrane trafficking [BR:
ngr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
NAEGRDRAFT_56631
Hops complex
NAEGRDRAFT_56631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
Vps39_2
DUF2560
DUF447_C
ORF6C
Motif
Other DBs
NCBI-GeneID:
8855354
NCBI-ProteinID:
XP_002682913
JGI:
Naegr1_56631
UniProt:
D2UZK3
LinkDB
All DBs
AA seq
1250 aa
AA seq
DB search
MLPHDEEDLLNGGDWDVGLGGFSSRQTTNKKLGFSTTKDFTTAGDKTNSSSNLTNNKKTN
DTSTLLSSAYNLNGIDSDEDNDDENEGLASSNKHDGETLPSDLLQQQNMGQDRFEVEEIK
FEFSKSFTHVRASKGNLLLATNQNTCIYVDDDFERYREFRLSHNDDDDDEKIHKCFIDPS
GFHVLISMTNGDNYYFNTQYNKNPKLVAKLKNMIIESIGWDAEQCNREETGTILLGTNDS
KIFECILYDDLKDPVKNSLKLLFDFNDCDMLVSTGPITGIEIEHFPKTKNSFNTYLVLVS
TRLRMFEFIGGPTLQDVFASYKQSFDLLKYKELPAKRSDMLPNSELHLFKKDSSSLTDQE
SFAWLSNAGVYHGVLNFANPQSRQSGTSIITESEVIQYDNKSSSQVISIAISEFHMFVLY
PEKLQILMQPPGLCTASSVNPMMLSSLLVDPMNDNQTNQQGIQGIDKFFGYGTTDNSNIT
GSSNNLNLFMASLTNVGEISLSDIRVVYQKTFPVGTCGELIGMCTDTSNRFIYLYSNSSV
WRILIEDEERDVWKLYLEQALDPKSSKESYFDVAFKLCKQDPKTKDIVLSAKADYFFKVG
RFNDAANIYAMTSKSFEQVSIAFHNKGQKDALRIYVLAKLQSLKKNIKTENQDATQLCCL
CTWLTEMYLDKINELYDLVSLQSQQTRDITSSNQVSFEEQYTVIKNEFRKFLEDNKKYLN
KETTFRLITSHGQTEEVLYYAMLIEDYERVISHCITEKEYSEALEILNKFCTTRAYEDYF
YKFSPILMQHLPKETVNTLTQKRFLDSGKLIPALMRYISHQQASMNNTGSLPPITLNSTF
HTLTNNLNITTALSSNNSMLSSYTKKKSPEDDDEDALTESLDEDDDNAKITQKLNENQQF
SSLLTNDQQNHVIRYLEWCIKKQENEDPAIHNLLLTLYADLDDDEKLLTFLDTEGENNFY
DPKYALRVCSQKKKIEACVRLYSAMQLFDDAVDLALENDDIDLARECADKPDDDENRKKL
WLKIAKHVINHNTGVKQAIEFLSYTDKIKLEDILPYFPDFSRIDDFKEEICKSLDQYKNE
IEKLKNDMQLATQTASEIREDIKELKHRYGFITSNAKCDLSSKSVLTTDFYLFPCQHVFR
ADALVEEVIKHTKSENGREKLKQLEEKRRLYNRQVELLNANSSSGNQSSGSNSGLLDQKE
LSQLQDELRELDEILSSECPLCGEMMINSIDEGFIASDENQSEILSWSIN
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgcttccccatgatgaagaggatttgttaaatggtggtgattgggatgttggattgggt
ggtttttcatccagacaaacaaccaacaagaaattgggtttttcaacaacaaaggatttt
actacagctggtgataaaacaaacagctcatccaatttaactaacaacaaaaaaaccaat
gatacatcaacattattatcatcagcttataatttaaatggaattgatagtgatgaagat
aacgatgatgaaaacgaaggtttggcctccagtaacaaacacgatggtgaaactttacct
tccgatttattacaacaacaaaatatgggacaagatagatttgaagttgaagaaatcaag
tttgaattttctaaatctttcactcatgttcgcgcatcaaaaggaaatttattattggcc
acaaatcaaaatacttgtatctatgttgatgatgattttgaaagatatagagaatttaga
ttatcccacaatgatgatgatgatgatgaaaaaatacacaagtgcttcattgatccatct
ggtttccacgttttgatatcaatgaccaatggtgataactattattttaacacacaatat
aacaagaacccaaaattggttgccaaattgaaaaatatgataattgaaagtattggatgg
gatgcagaacaatgtaatagagaagaaactggaactattttattgggtactaatgacagt
aagattttcgaatgtattctctatgatgatttgaaagatccagttaaaaactcattgaaa
ttacttttcgactttaacgattgcgacatgttggtcagtactggaccaattacaggaatt
gaaattgaacacttcccaaagactaagaattcattcaacacctatttggttcttgtttct
acaagattgagaatgttcgaatttattggaggtcctactcttcaagatgtatttgcttca
tacaaacaatcatttgatttgttaaaatataaggaattgcctgcaaagagaagtgacatg
ttaccaaatagtgaattgcacttattcaaaaaggattcatcctctctcactgatcaagaa
tcatttgcatggctcagtaatgctggtgtttatcatggtgttttgaactttgcaaatcct
caatctagacaaagtggcacaagtattataactgagagcgaagtaattcaatatgataat
aagagttcatctcaagttatttcaattgctattagcgaattccacatgtttgtattgtat
cctgaaaagttacaaattttaatgcaaccaccaggtctatgtactgctagtagcgttaac
ccaatgatgttaagctcattattggttgatccaatgaatgacaatcaaactaatcaacag
ggtattcaaggcattgataaattctttggatatggcaccactgataattcaaacattact
ggaagtagtaataatttaaatctcttcatggcttcccttacaaatgttggcgaaatctcc
ttgtcagacattagggttgtctatcaaaaaaccttcccagttggaacatgtggtgaattg
attggaatgtgtacagatacttccaatagattcatttatttgtatagtaattcaagtgtt
tggagaattttgatagaggatgaggaaagagatgtttggaaattgtacttggaacaagct
ttggatcctaaatcttctaaggaatcctattttgatgttgccttcaaattatgtaaacaa
gatccaaaaacaaaagatattgtattatctgcaaaggctgactatttcttcaaagttggt
agattcaatgatgctgccaacatttatgccatgacgtccaagagttttgaacaagtttcc
atagctttccataacaagggtcaaaaagatgctttacgtatctatgttttggccaaatta
caatctcttaaaaagaatatcaaaacagaaaatcaagatgcaacacaattatgttgtttg
tgtacctggttaacagaaatgtatttggataagattaacgaattgtatgatttggtttca
cttcaatctcaacaaacacgtgacattacaagctctaatcaagtgagctttgaagaacaa
tatacagtcattaagaatgagtttagaaagttcctcgaagataacaagaaatacttaaac
aaggaaacaacattcagattgattaccagtcacggccaaacagaagaagttttgtactat
gccatgcttattgaagattatgaaagagttattagccactgtattactgaaaaggagtat
agtgaagctttagaaattcttaacaagttttgtacaacaagagcgtacgaagattacttt
tacaagttttctccaatattaatgcaacatttaccaaaggaaactgtcaatacattgaca
caaaaacgtttcttggattctggtaaattaatccctgcgctgatgagatacatttcccat
caacaagcctctatgaataatactggtagtctaccaccaatcactctcaatagcactttc
catactctaactaacaaccttaatatcactacagctctctccagtaacaattccatgttg
tcaagctatactaaaaagaagtctccagaagatgatgatgaagatgccctgactgaatct
ctcgacgaagatgatgataatgccaaaattacacaaaaactcaacgaaaatcaacaattt
tcctcactcttgacaaatgatcaacaaaatcacgtcattagatacttggagtggtgtatc
aagaaacaagagaatgaagatccagctatccacaatttacttttaacattgtatgctgat
ttagatgatgatgaaaaactcttgaccttcctggatacagaaggtgaaaataatttctat
gatccaaagtatgctcttcgtgtttgcagtcaaaagaaaaagatagaggcatgtgttaga
ttatacagtgctatgcaattatttgatgacgctgtggatctcgccttggaaaatgatgac
attgacttggccagagaatgtgctgataaacctgatgatgatgaaaataggaaaaagttg
tggctcaagattgcaaagcatgttattaaccataatactggtgtcaaacaggctattgaa
tttttgagctataccgacaagatcaaattagaagatattttaccatacttccctgatttt
tctagaattgatgactttaaggaagaaatttgtaaatcattggatcaatataagaatgaa
attgaaaagttgaaaaatgatatgcaattggcaactcaaacagctagtgagattagagaa
gatattaaggagttgaaacatcgttatgggtttattacttccaatgccaaatgtgatctt
tcatccaagtctgttttaacaacagatttctacttattcccttgccaacatgttttcaga
gctgatgcccttgtcgaagaggttatcaagcacaccaaatctgaaaatggcagagaaaag
ttaaaacaattagaggaaaagagaagactctacaatagacaagttgaattattgaatgcc
aatagtagtagtggtaatcaaagttctggttccaatagtggtctcctcgatcaaaaggaa
ttgtctcaactccaagatgagttgagagagttggatgaaatcttatcctctgaatgtcca
ctatgtggtgaaatgatgattaattctattgatgaaggtttcattgcaagtgatgaaaat
caaagtgaaattctctcttggtccatcaattaa
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