Naegleria gruberi: NAEGRDRAFT_57795
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Entry
NAEGRDRAFT_57795 CDS
T01241
Name
(RefSeq) CNH domain-containing protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ngr
Naegleria gruberi
Pathway
ngr04142
Lysosome biogenesis
ngr04145
Phagocytosis
ngr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
NAEGRDRAFT_57795
04142 Lysosome biogenesis
NAEGRDRAFT_57795
04148 Efferocytosis
NAEGRDRAFT_57795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngr04131
]
NAEGRDRAFT_57795
Membrane trafficking [BR:
ngr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
NAEGRDRAFT_57795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
WD40_WDHD1_1st
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
VPS18_solenoid_2nd
Hira
Motif
Other DBs
NCBI-GeneID:
8849085
NCBI-ProteinID:
XP_002678158
JGI:
Naegr1_57795
UniProt:
D2VCG0
LinkDB
All DBs
AA seq
905 aa
AA seq
DB search
MGHTAFEYFQLLDGLGKVESLCVWCNTLFVATTDGTLSLYNIRYDKKANKEKFTCALDSQ
KKQFSKKPITQMCSVPELGMLICLTDGFIKVYTLGMLSEIDTLKNLKQNQLKGCMFFALK
KHNGEFTMAVASKKKISIFEYGSKESKFKYQQELVLPDAAKSLNWSGDKLCVGFKKEYSL
IDVLKPSAMPQKLFDTGVSQQNTLGLSLPNETIVVLNGIGVTINFSGKPSRSHGIGWSEA
PNMIGYLKPYLIAPLSVFVEVRILSTTVKKDTFIQSLPLKDIITTSQQNFIDLDHPENMD
HGMGVGFKVRNELDRDDTIDPENRIFLASKSSIYVMVMKQFDLQAGELLSNQQFELALHL
CNTVENTRYKIEDWRVSSIHTQFGFHLFAKGEFDKAMEHFDKTKDDPRMIISLFPDLLPP
KSSFKFSLPYTSEEQRKIDHFLKDIEQRNKALQALIQYLLHRRTTEKDLNEQALDEAEAV
DTALLKALLYTNDPHVEDFITQPNHCNIMDSQKTLHSHQKFRELVLFYKTKGLHDRALEL
LKLLGDKSSATSIYTDLIGVMPTINYLKELQQVGEGQQYILEFSKWVLSAEPLRGLKIFQ
VPNCPISVNEILSHLDLFDHALAMKIAYLEHLIKVEKSVDPNLHNQLLLYYLEYVTKYST
SASNYEEDSIPGLLQPVKDVKRRMNDFLTHSTFYHSEKMLSRFPFDSLYEERAILLSKIN
RHSQALTIYVTKLESMDKAEKYCEQHYNPDGSEESREIFIILLNMILKQSASTENNLFFE
DAIGLLERHFSKIDLIKAIKLLPENVPISDLMKYFEATLRCHTEQKRRAQIMKNINRSEN
LQVHEEVIKERKRVVKVKPDRTCAVCNKKLGMSAFVCYPNGVVTHYICAKNMNVCPVTGK
HFMKL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgggacatacagcctttgaatatttccaattattggatggattgggaaaggtagaatca
ttgtgtgtgtggtgcaatactctttttgtggccaccactgatggtaccttatccctttac
aatattcgatatgataaaaaggcaaacaaggaaaagtttacttgtgctctggacagtcaa
aagaaacaatttagcaaaaagccaatcactcaaatgtgctcagttccagaattgggaatg
ttgatttgtttgacagatggatttattaaagtatatactctcggaatgttgagtgaaatt
gatacactcaagaatttaaagcaaaatcaattgaagggatgcatgttttttgctctgaaa
aagcacaatggtgaatttacaatggcagttgcatcaaagaaaaagatttcaatctttgaa
tatggtagtaaggaatctaaatttaaatatcaacaggaattggttctgccagatgctgcc
aaatctttgaattggagtggcgacaagctctgtgttggtttcaaaaaggaatattcatta
attgatgtattaaagccatctgccatgccacaaaaacttttcgatacaggtgtttcacaa
caaaatactcttggattatcacttcccaatgaaactattgtggttttgaatggaattggt
gtgaccatcaacttttctggtaaaccttcacgatcacatggtattggatggagtgaagct
ccaaacatgattggctatttgaaaccatacctcattgcaccactctctgtttttgttgag
gttagaattttgagtaccactgtgaaaaaggatactttcattcagagtcttccactcaag
gatatcattacaacaagtcaacagaatttcattgatttggatcatccagaaaatatggat
catggtatgggtgttggattcaaggtaagaaatgaactcgacagagatgacaccattgat
ccagaaaatagaattttcctcgcttcaaagagttccatctatgttatggtaatgaaacaa
tttgatttgcaagctggagaactcttatccaatcaacaatttgaattggctctccatctc
tgtaatactgtagagaataccagatataagattgaagattggagagttagttccattcac
acacaatttggttttcacttgtttgccaaaggtgaatttgacaaggcaatggaacatttt
gataagactaaagatgatccacgtatgattatttcactcttccctgatttgttaccacca
aaatcttcatttaaattctccctcccttacacttctgaagagcaacgaaagattgatcac
tttttaaaggatattgaacaaagaaataaggcccttcaagccctgattcaatacttgctt
cacagaagaacaacagaaaaggatttgaatgagcaagctctagatgaagctgaggcagtt
gatacagcattattgaaggcacttttatacactaatgaccctcacgttgaagattttatc
acccaaccaaatcattgtaacattatggacagtcaaaagaccctccactcccatcaaaag
tttagagagttggttctcttctacaagaccaaagggttgcacgatagagctcttgaattg
ttgaaattattgggagacaagtcatcagcaacatctatttacaccgacttgattggtgtc
atgccaactattaactatttgaaggaattacaacaggttggagaaggacaacagtacatt
ttagaattctcaaagtgggtactcagtgctgagccacttcgtggtttaaagattttccaa
gtaccaaattgtccaattagtgtaaatgaaattttatctcacttggatttgtttgatcat
gctctggccatgaagattgcctatttggaacacttgattaaggttgaaaaatctgtggat
ccaaaccttcacaatcaacttttattgtactatttggaatatgtgaccaaatactcaaca
tcagcatccaactatgaggaagatagtattcctggactccttcaaccagttaaggatgtc
aagcgtagaatgaacgactttttgacccactctactttttaccactctgaaaagatgctt
tcgagattcccattcgattccctgtacgaagagagagctattttgttgagtaagattaat
agacactcccaagctctgactatctatgttaccaaattggaaagtatggataaggctgag
aaatattgcgagcaacactataatccagatggaagtgaagaaagtagggaaatatttatc
attcttctcaatatgattttaaagcaaagtgccagtacagaaaacaatttattctttgaa
gatgctattggattattggaacgtcacttttcaaagattgacttgatcaaggcaattaaa
ttgctcccagaaaatgttccaatatctgatttgatgaagtactttgaagcaactctgagg
tgccatacggaacaaaagagacgtgctcaaattatgaaaaatatcaatcgatctgagaat
ctccaagttcacgaagaagtcattaaggaaagaaagagagttgtaaaggttaaaccagat
agaacttgtgcagtgtgcaataagaaattaggtatgagtgcctttgtttgttatcctaat
ggtgtcgttacacattatatttgtgctaaaaacatgaacgtttgtccagtcacaggtaaa
cactttatgaaattgtaa
DBGET
integrated database retrieval system
