Naegleria gruberi: NAEGRDRAFT_58428
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Entry
NAEGRDRAFT_58428 CDS
T01241
Name
(RefSeq) transcription initiation factor
KO
K03124
transcription initiation factor TFIIB
Organism
ngr
Naegleria gruberi
Pathway
ngr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NAEGRDRAFT_58428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_58428
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NAEGRDRAFT_58428
Prokaryotic type
Archaeal type
TFB
NAEGRDRAFT_58428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
8852847
NCBI-ProteinID:
XP_002675581
JGI:
Naegr1_58428
LinkDB
All DBs
AA seq
351 aa
AA seq
DB search
MSQPTTSTSSSLPPPPRKQSPTRASGVRLPKPLENANYQTKINLMFANHIMFNPMYCKTC
STNEHILEDRSEGNFVCTKCGCVISRLIDFENNDWRDFDEDKPSNSRVGNSTLEENEDVL
IINESRVLGTRIKPDSSKLIKLGKMNIENEFLSEIFKQVTSIVVDQFKLESRYTFKIKEL
LKEIYSENRRTFNNKTRNQCLAACLFCGLKSEGIGKTLKEFCVILHVSKEEISKWVSIIQ
KNPKTKELIKTKDYNSPQAFVEDFCKKLHLPPSAISKIKDLVDKAIQSDLLSGKSPSTVA
AACLFYFISTSTDQKVTSLQIGEQEIEGATSITSNTFKNALDSIITVFKKQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccaacaacgtccacttcctcatcattgccaccaccaccacgaaaacaatca
ccaacccgagcatcaggtgttcggcttcccaaaccactcgaaaatgcaaattatcaaaca
aaaatcaatttaatgttcgccaatcatatcatgttcaatccaatgtattgcaaaacatgc
tccactaatgaacatattctggaggatagatcggaaggtaatttcgtatgtaccaagtgt
ggctgcgtgattagtcgattgatagactttgaaaataatgattggagagattttgatgag
gataaaccaagtaattctcgtgtaggaaattcaaccttagaagagaatgaggatgtattg
ataattaatgaatctagagtgctaggaactagaattaaaccagattcttctaaattgatt
aaactaggaaagatgaatattgaaaatgaattcctctctgaaattttcaaacaggttaca
tcaattgttgtggatcaattcaaattggagagtagatatacatttaaaattaaggaatta
ctcaaagaaatttattctgaaaataggagaacgttcaataacaagacgaggaatcaatgt
ttagcagcttgcttattctgtggactcaaatctgaggggattggtaagacattgaaggag
ttttgtgtgattttacatgtttcaaaggaggaaatatcaaaatgggtttcaatcattcag
aagaatccaaaaactaaggagctcatcaagactaaggattacaattcgcctcaagcattt
gttgaggatttctgtaagaaattacatcttccacctagtgccatttcaaagattaaggat
ttggttgacaaggccattcaatctgatctgctctctggaaaaagtccatcaacagttgca
gctgcttgtttattctattttatttccaccagtactgatcagaaagtgacaagtcttcaa
attggagaacaagaaattgaaggagctacatccattactagtaatacattcaagaatgct
ctggattcaattattactgtatttaagaaacaataa
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