Naegleria gruberi: NAEGRDRAFT_58488
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Entry
NAEGRDRAFT_58488 CDS
T01241
Name
(RefSeq) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
ngr
Naegleria gruberi
Pathway
ngr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NAEGRDRAFT_58488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_58488
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
NAEGRDRAFT_58488
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
DUF6686
T2SSE_N
Motif
Other DBs
NCBI-GeneID:
8852243
NCBI-ProteinID:
XP_002675436
JGI:
Naegr1_58488
UniProt:
D2VKH8
LinkDB
All DBs
AA seq
453 aa
AA seq
DB search
MSRAVKTPVNQILHTNVAVVRMKIQKAVFEIACYKNSVVSWRKGIEKDLSEVVQIDTVFT
NVSKGEAAKKTDLQKYFGTSDTKEVCKKILQDGELQVSTKEREEMYESMFKDIVTIITNK
CINPDTQRPYPGGVIERALKEQIHFSVKPSKSTKQQALEAISKLKRKIPIEKAHMRVKLT
LSGKENIKKLRQLFKTANKEEEQVKFEQDDYSPETETANIICRIDPGLYRHIFDIVDEED
GEVQVLDTTVSEEGDTTIDELDDKQDESEKKPIHHSTVENSDNEEEEETSKKSKKKSEDS
KKKPTKKNKKSNKNESDDEKPEKTTTTKDESDEEQLISSSNKKQSKKEKKKAKKKQTQQD
DSDDEAAATIEDDEEEEKPKKTAAKKAPTSNKKASSHSDEDQEPSSNVNNDSDEELVQTS
SNKKQSKKEKKKAKKFAKQSSTSTQEDDEQDDE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgagctgtaaaaacacctgtaaatcaaatcttacacaccaacgttgctgtggtg
aggatgaaaattcaaaaagcagtttttgaaattgcttgttataaaaacagtgtcgtttca
tggagaaagggaattgaaaaggatttgtcagaagttgttcaaattgatacagtttttaca
aatgtttctaaaggagaagctgcaaagaagactgatcttcaaaagtattttggaactagt
gatacaaaggaagtttgtaaaaagattttacaagatggtgaattacaagtgagtactaag
gaaagagaggaaatgtacgaatcaatgtttaaggatatagttacaattattacgaataag
tgtataaatcctgatacacaaagaccatatcctggaggagttattgaaagagctctgaaa
gaacaaattcacttttctgtaaaaccaagcaagagtactaaacaacaagctttggaggcc
atctcaaagttaaagaggaaaattccaattgaaaaggcccatatgcgtgtaaagttgaca
ctaagtggcaaggaaaatattaaaaaattgagacaactcttcaagactgccaataaggaa
gaagaacaagttaaatttgaacaagacgattattcaccagagactgaaactgcaaacatt
atttgtagaattgatccaggtctctatcgtcacatttttgatattgttgatgaagaagat
ggagaagttcaagttttggatacaactgtctctgaggaaggtgatacaaccattgatgaa
ttggatgataagcaagatgaatctgaaaagaaaccaattcaccattctacagtggaaaat
tctgacaatgaggaagaagaggaaacatcaaagaagagcaagaaaaagtctgaagattcc
aagaagaaaccaaccaaaaagaacaaaaagtccaacaagaatgaaagtgatgatgaaaag
ccagaaaaaaccaccactactaaggatgaaagtgacgaagagcaattaatctcaagttcc
aacaagaaacaatccaaaaaggaaaagaagaaggccaagaagaagcaaactcaacaagat
gattctgatgatgaagctgctgccaccattgaagacgatgaagaggaagagaaaccaaaa
aagacagctgctaagaaagcaccaacatccaataagaaggcctcttctcattcagatgaa
gatcaagaaccatcatccaatgtaaataatgattcagatgaagaattagtccaaacctcc
tccaataagaaacaatctaaaaaggaaaagaagaaggcaaagaaattcgccaaacaatca
agtacctcaacacaagaagacgatgagcaagacgacgaataa
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