Naegleria gruberi: NAEGRDRAFT_58770
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Entry
NAEGRDRAFT_58770 CDS
T01241
Name
(RefSeq) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NAEGRDRAFT_58770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_58770
Enzymes [BR:
ngr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NAEGRDRAFT_58770
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NAEGRDRAFT_58770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
8862460
NCBI-ProteinID:
XP_002674189
JGI:
Naegr1_58770
LinkDB
All DBs
AA seq
462 aa
AA seq
DB search
MPPRGTTSKFFQKKQQRDSSSEEESSEASEEEEIKTRVTRSKTKPSTSKKASSSTSNKKK
KPIDEDDEDFEVLSFSEEDTSSEEEYKVAKKKNTKAKATTKTKGSQSKSTRTTKRKKKEE
SDSSEGEEEEEQQKKKKKKTTKSNPNGPKLTEKQREEMNQIIKKIGESKKLFIGCHVSYG
SKGVETAPIAAYETGCYGGFAFFLGNQKTYSQKEYTDKMVSTFIENCKKYNYDPKNLLPH
ASYLINLANPDQTKLEKSKTLFLSEYQKCERLGAVRYNFHPGSTVGATTLEAGCKQIAEC
INWANEQTVGVCSVLECTAGGGHSIGHKFEHLKMIIDHVEDKNRVGVCLDTCHMFAAGYD
LRTQEGCEKVFNEFDEIVGFKYLKGMHLNDSKVKLGTKKDRHENLGKGHLGIEVFKYIVN
NENFRNIPMVLETPEGLYADEIQELYSYYNEKEVKPESTIDE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcctccacgtggaaccacaagtaaattctttcaaaagaagcaacaacgagacagtagt
agtgaagaagaatcatctgaagcttcggaagaggaggaaatcaagacaagagtaaccaga
agtaaaacaaaaccttctacatcaaagaaggcttcttcatcgaccagtaataagaagaaa
aaaccaatagacgaggacgacgaagattttgaagtgctctctttctcagaggaagatact
agtagtgaggaggaatataaagtagcaaaaaagaagaataccaaagcaaaagcaacaaca
aaaacaaaaggttcccaatcaaaatcaacaagaacaacaaaacgaaaaaagaaggaagaa
tcagactcatcagaaggagaagaggaagaagaacagcaaaaaaagaagaagaaaaagaca
acaaaaagcaatccaaacggaccaaagttaacagaaaagcaaagagaggaaatgaaccag
atcataaaaaagatcggagaaagtaagaagttgttcataggatgtcatgtatcttatgga
tctaaaggtgtggagactgcacctattgctgcctatgaaacaggttgttatggtggattt
gcattcttcttgggaaatcagaaaacttatagtcagaaggaatatacagacaagatggtg
agcacatttatcgagaattgtaaaaagtataattatgatccaaagaatttactgccacat
gccagttatttgattaatttagccaatcctgaccaaactaaattggaaaagtcaaagaca
ttattcttaagtgagtatcaaaaatgtgaaagattgggagctgttagatataatttccat
cctggctcaactgtgggtgctacaacactggaagcaggttgtaaacaaattgcagaatgt
atcaattgggccaatgaacaaactgttggtgtatgttcagttttggagtgcactgctggt
ggaggccattcaattggtcacaagtttgaacaccttaaaatgattatcgatcatgttgag
gataagaatagagttggagtttgtctcgatacttgccacatgtttgcagctggctatgat
ttgagaacacaggaaggttgtgaaaaagttttcaatgaatttgatgaaattgttggattc
aaatatttgaaaggaatgcacttgaatgatagcaaagtaaaattaggtaccaagaaggat
cgtcacgagaatttaggaaaaggtcatttaggaatcgaagtattcaaatatattgtaaat
aatgaaaactttagaaatattccaatggttttagaaacacctgaaggattatatgctgat
gaaatacaggaattgtatagttattataatgaaaaggaagttaaacctgaatcaactatt
gatgaataa
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