Naegleria gruberi: NAEGRDRAFT_59222
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Entry
NAEGRDRAFT_59222 CDS
T01241
Name
(RefSeq) U4/U6-associated splicing factor HPRP3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_59222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_59222
Spliceosome [BR:
ngr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
NAEGRDRAFT_59222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
RdRP_1
Motif
Other DBs
NCBI-GeneID:
8860847
NCBI-ProteinID:
XP_002672558
JGI:
Naegr1_59222
UniProt:
D2VU08
LinkDB
All DBs
AA seq
507 aa
AA seq
DB search
MFLNRKQSSSSSTQQQRAEHQQQQENDGRDGAEQKEEEVDYGSLIMDEFGNLVDANGKII
QSKRTVSSAKINQNRKQKKENILKIEKPPNIKKLDFYDSTLSVPKAERKKRNRGLAFHEQ
GEFIEKAKMMRELEEEERQRALLKEQLEKERKEQEKIEKEKERLRLIQEELEIGELHMML
GCRRIEDFESTIPDAFWWDKKILKSCKKADENVNNHVDIYQRDFDAENEVYSIKEKLVKH
DFVEHPIIVDPLKKKVDAGPLPLMLTKKEQKKMRTQQRIQREKENQRKIALGLTPPPPPK
ANMGNYMKALLASGQDATELEMKIKKEIEERMQAHEERNNNEKLTKEQRKEKKIRKITED
AESELITILYSIPNIAHPQTRFKINTAKEKGITGAVLSYPSQTRDKDRILLIAEGGKKFL
KKYDDVILNKIDWSKVEGVQSENTIPTQSDNQPSARMLWKGTVLKRNFQYFKFQKFEDEE
SIKNYLNDHGCIHYFDVFANDKNSNTV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaatagaaagcaatcatcatcatcttcgacgcaacaacaacgagcagaacat
cagcaacaacaggaaaatgatggtcgggatggtgctgaacaaaaggaagaggaagtagat
tatggatcattaattatggatgagtttggtaatttggtggatgctaatggtaaaattata
caatctaaaaggactgtcagcagtgcaaagattaatcaaaatagaaaacaaaagaaggaa
aatattttgaaaattgaaaagccaccaaatattaagaaattagatttttatgattctact
ttaagtgttccaaaggctgaaagaaagaaaagaaatagaggattagctttccatgaacaa
ggcgaatttattgagaaagccaaaatgatgagagaattggaagaggaagaaagacaaaga
gcacttttgaaagaacaattggaaaaagaacgaaaggaacaagaaaaaattgaaaaagaa
aaggaaagacttcgattaattcaagaagaattagaaattggagaattacacatgatgcta
ggttgtagaagaattgaggattttgaatcaactattccagatgctttctggtgggataaa
aagattcttaagagttgtaaaaaagcagatgaaaatgttaataaccatgtagatatttat
cagagagattttgatgcagaaaatgaagtgtattctatcaaggagaaattagtgaaacat
gattttgtggaacacccaatcattgttgatccactcaagaagaaggttgatgctggtcca
ttacctctcatgttaacaaagaaagaacaaaagaagatgagaacacaacaaagaattcaa
cgtgaaaaggaaaatcaaagaaagattgctcttggattgacacctcctccaccaccaaag
gccaatatgggaaattacatgaaagctctattggcttctggtcaggatgcaactgaattg
gaaatgaaaattaagaaggaaattgaggaaagaatgcaagctcacgaagaaagaaataac
aatgaaaagttaaccaaggagcaacggaaagaaaagaaaattagaaagattactgaagat
gccgaatcagaactcattacaattctctattctataccaaatattgctcatcctcaaacc
agattcaagattaatactgccaaagaaaagggtataacaggagctgtcctatcatatcca
tcccaaacaagagacaaagatagaattttacttattgctgaaggaggtaaaaagttttta
aagaaatacgacgatgtaatattaaataagattgactggtcaaaagttgaaggtgtacaa
tcagaaaataccattccaacacaatcagacaaccaacctagtgccagaatgttatggaaa
ggaactgttttaaaaagaaatttccaatactttaaattccaaaagtttgaggatgaggaa
tccatcaaaaattatctgaatgaccatggatgtatccattatttcgatgtttttgccaat
gataagaatagtaatacagtttaa
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