Naegleria gruberi: NAEGRDRAFT_59694
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Entry
NAEGRDRAFT_59694 CDS
T01241
Name
(RefSeq) exonuclease family protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ngr
Naegleria gruberi
Pathway
ngr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NAEGRDRAFT_59694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_59694
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
Pre-60S particles
RNases
NAEGRDRAFT_59694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
8857642
NCBI-ProteinID:
XP_002670469
JGI:
Naegr1_59694
LinkDB
All DBs
AA seq
729 aa
AA seq
DB search
MPLRDRVSNFLELVKKGSTSSSETQNNNNSKENQQENKKRKNISDNSSKEEEEHTQLEIV
QESKKRKTNEKVQSTTPLTPFQKKVSRIEKQTKVFGSDTKAILNFHLKDLKKKFLTLNDL
QALMLWSLMGHSCTTAKKKNNDNEIYEAVLFTPRWIHIMNMGLIDKVVIVHLDSMSKEVF
EKYQKSMPNLAKSMERYILADGIPSKRTPFLLVNPPWTKDQANMLMITEHRTANYWKKTF
LHRLFKRGISFCKEKTTKKTSSSYQTSSNKPFSFATVSGTLNVLENSSKKNTKIRIEEET
IEITEKLEVTLRDDIVQEDKEEQVDNNENENDQPKNGSSKETTLNDLLLSQEELSENNYP
IFKDPTELESSGYVCTSNWKTPAKKYTLLALDCEMCLTKKGDELTRVTFVDEQGTVVYDK
LVKPHEQIIDYRTMFSGITKEMLENVETRLEDVHKEVQEFISEDTILVGHSLENDLICLK
IAHKRVIDTAVIFINASTLGTKYKQSLKHLTRKYLSREIQVNSIDKIGHDSSEDATAALD
LVKVVLKEGIEYVHKRERRGTDFKGQQENVFEFLSNGEKRSVMVDRPYNLNGIVSGSLSD
AIPCHSDEDVFQKSKKFVANSEYDLVFTHFSDLGTYYEKNDFDPIQDKDHPEGKKHDENI
RAILSNLDNHFKELFQSASNNSLFIVTTGHGNISRLEREFKKEDKQKRAKEIINMIENCG
GISFISMKE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcccctacgtgatagagtttcaaatttcctagagttggtcaagaagggttccacttca
tcatcggaaactcaaaacaacaacaacagcaaggagaatcagcaagagaacaaaaagaga
aagaatatttctgataatagttcaaaggaagaggaggaacatactcaactggaaattgtt
caagaaagcaaaaagagaaaaaccaatgaaaaagttcaatcaactacaccactgactcct
tttcagaagaaagtttctcgaattgaaaaacaaaccaaagttttcggaagtgacacaaag
gctattttaaatttccatttgaaggatttgaaaaagaaattcctcactctcaatgattta
caagctttaatgttgtggtcattgatgggtcactcatgcacaacagcaaagaaaaagaat
aatgataatgaaatttatgaagctgtattatttacaccaaggtggattcatataatgaat
atgggattaattgacaaggttgtaattgttcatttggattcaatgagtaaggaagttttt
gaaaagtatcaaaaatcaatgccaaatcttgcaaaatcaatggaacgatacattttagca
gatggaataccttcaaagaggacaccatttcttttggtcaatcctccatggaccaaggat
caggccaacatgctcatgattacagaacacaggacagccaattattggaaaaagaccttc
cttcataggttgtttaagagaggaatttctttctgtaaggaaaaaacaaccaaaaagaca
tcaagttcttatcaaacctcatctaacaagccattcagttttgctaccgtatcaggtact
ttgaatgttttggaaaattcttcaaaaaagaatactaagatacgcattgaagaggaaaca
atagaaataaccgaaaaattagaggtaactctgagagatgacattgtacaggaggataag
gaagaacaagttgataataacgagaatgaaaatgatcaaccaaagaatggttcgagtaag
gaaaccaccctcaatgatttattactctcccaggaggaattatcagaaaataattatcca
atatttaaagatcctaccgagcttgaaagttcaggttatgtttgcacctccaattggaag
actcctgctaaaaagtatacacttctagctctcgattgtgaaatgtgtctgaccaagaag
ggagatgaactcactcgtgtaacatttgtggatgagcaaggaactgtagtatacgataaa
ttggtaaagcctcacgaacaaattattgactatagaactatgttcagtggaattaccaag
gaaatgctggaaaatgtggaaactagacttgaagatgttcacaaagaggttcaggaattc
atatctgaggatactattcttgtggggcactctcttgaaaatgatttaatttgcctgaaa
atcgctcacaaacgagttattgatacagcagtcattttcattaatgcttcaactcttgga
acaaaatataagcaatccctcaagcatttaacaagaaaatatctctcccgagaaattcaa
gtcaatagcattgataagattggacatgatagctctgaagatgccacagcagctctagat
ttggtaaaagtagttctcaaggagggtatcgaatatgtacataagagagaaaggagagga
accgattttaagggacaacaggaaaatgtttttgaatttttgagtaatggagaaaagagg
tcggtcatggttgatagaccttacaaccttaatggtattgtttcaggatccctctcagat
gctataccttgccacagtgatgaggacgttttccaaaagtctaaaaagtttgttgccaat
tcagaatatgatttggtgtttacacacttttcagatttgggaacctattacgagaagaat
gattttgatccaattcaagataaggatcatcctgaaggaaaaaaacacgatgaaaatatc
agagcgatactaagcaatctcgacaatcatttcaaagagctcttccaaagtgcttctaac
aattctctcttcattgtcaccacaggacatggaaatatttctcgattggaaagggaattc
aaaaaggaagacaaacagaaaagagcaaaggaaattattaacatgattgaaaattgtgga
ggaatatctttcatttcaatgaaagagtaa
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