KEGG   Naegleria gruberi: NAEGRDRAFT_60473
Entry
NAEGRDRAFT_60473  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
ngr  Naegleria gruberi
Pathway
ngr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NAEGRDRAFT_60473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngr03041]
    NAEGRDRAFT_60473
Spliceosome [BR:ngr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    NAEGRDRAFT_60473
 Complex B
    NAEGRDRAFT_60473
 Complex C
   U2 SnRNP specific factors
    NAEGRDRAFT_60473
SSDB
Motif
Pfam: RRM_1 RRM_ACIN1 RRM_5 RRM_occluded RRM_MUD2_C PVC12_2nd F07F6_N
Other DBs
NCBI-GeneID: 8859447
NCBI-ProteinID: XP_002679074
JGI: Naegr1_60473
UniProt: D2V9Y0
LinkDB
AA seq 212 aa
MQQPQQEITGDDQEQIMPNNTIYINNINEKIKVPTLKKQLYSMFGQFGEVLDVIASRYEK
TRGQAFIVFKDVATATAAKKKLNGYVFHDKPMHINFAKSKSDATAKLDGNYEEYKAKRKV
KQESSKQSRREENLVPSSVLFIENLPRDVEKSSELLETLFNNYDGYKKLRLVGEKGVAFV
EYETIEQATSAREGLQSWKIKQQPMRISFKKM
NT seq 639 nt   +upstreamnt  +downstreamnt
atgcaacaaccacaacaagaaattacaggcgatgatcaggaacaaatcatgccaaacaac
acaatatacataaataatattaatgaaaagatcaaagtgcctactcttaaaaaacaatta
tatagtatgtttggacaattcggagaagttttggatgtcatagcaagtagatatgaaaag
actagaggacaagcttttattgtatttaaagatgtagcaacagcaacagcagcaaagaag
aaattaaatggatatgtattccatgataagccaatgcatattaattttgcaaaatctaaa
agtgatgctacagctaaattagatggaaattatgaagaatataaagcaaagagaaaagtt
aaacaagaatcatctaaacaatctaggagggaagaaaatctggttccaagcagtgtactt
ttcattgaaaatttaccaagggatgttgaaaagagttcagaattacttgaaacattattc
aacaattatgatggatataagaaattgagattggtaggagagaaaggtgttgcctttgtg
gaatatgaaactattgaacaagctacatctgctagagaaggtcttcaatcatggaagatt
aaacaacaaccaatgcgaatcagtttcaaaaagatgtaa

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