Naegleria gruberi: NAEGRDRAFT_60607
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Entry
NAEGRDRAFT_60607 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
ngr
Naegleria gruberi
Pathway
ngr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAEGRDRAFT_60607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_60607
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NAEGRDRAFT_60607
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
NAEGRDRAFT_60607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
8848488
NCBI-ProteinID:
XP_002677284
JGI:
Naegr1_60607
UniProt:
D2VEP3
LinkDB
All DBs
AA seq
248 aa
AA seq
DB search
MSSRIEYISPEGLRVDGRRSHEIRNIKFKLNLFSRADGSAYYEQGNTRVLAAVYGPREVK
NKSQMKNDRAIINCEYSMATFSTGERKRQFKKDRRSTEISVVIRQTFESVILTHLYPRTQ
IDIFMQVLQADGGTRCACINAATLALLDAGIPMKDFVVSCAAGFIQGSPLTDLNYIEDCA
GGPDVPIALLPKHDKVTLLQMDSKLSLDQFEKVLEHAIEGCKQIHKVIDEQLKKHTYALV
NKRGLFSA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcgtattgaatacatttcacctgaaggattgcgagttgatggaagacgttcc
catgaaattagaaatattaaatttaaattaaatttatttagtagagccgatggatcagca
tattatgaacagggcaatacacgtgtattagctgctgtttatggtccgagagaagtcaaa
aataaatcacaaatgaagaatgatagagcaattattaattgtgaatatagtatggcaaca
tttagtacaggagaaagaaagagacaattcaaaaaggatagaagatcgactgaaatttca
gttgtgattagacaaacatttgaatctgtaattttaacacatttatatccaagaacacaa
attgatattttcatgcaagttcttcaagctgatggaggtactagatgtgcttgtataaat
gctgcaacacttgccttattagatgcaggtattccaatgaaagattttgttgtttcatgt
gctgctggatttattcaaggttctccattaacagatttaaattatattgaagattgtgct
ggtggtccagatgtaccaattgctcttcttccaaaacatgataaggtcactttattacaa
atggattcgaaattatctttggatcaatttgaaaaggttttggaacatgcaatagagggt
tgtaaacaaattcacaaagttatagatgaacaattgaagaaacatacgtatgcactggtg
aataaaagaggtctgttttcggcctaa
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integrated database retrieval system
