Naegleria gruberi: NAEGRDRAFT_60899
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Entry
NAEGRDRAFT_60899 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ngr
Naegleria gruberi
Pathway
ngr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NAEGRDRAFT_60899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_60899
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_60899
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
NAEGRDRAFT_60899
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
NAEGRDRAFT_60899
RSF complex
NAEGRDRAFT_60899
WICH complex
NAEGRDRAFT_60899
B-WICH complex
NAEGRDRAFT_60899
NORC complex
NAEGRDRAFT_60899
BRF complex
NAEGRDRAFT_60899
NuRF complex (fruit fly)
NAEGRDRAFT_60899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
8858159
NCBI-ProteinID:
XP_002671790
JGI:
Naegr1_60899
UniProt:
D2VVJ6
LinkDB
All DBs
AA seq
1069 aa
AA seq
DB search
MDTSDAEEAAPPKKTTKRRTPARRSRAKKDEDEEEQQESSEEEEEEEEEDNDKSGNYRGE
GEESSSEEESEEPQEKYQFISEQTSKHLEKIRKEQKSLLNRLKEKQKKELVGIEDPQEKV
KVTFRHLLEQTEIYSSFTPNLSMHTIIDGTSSSKKGGSRRKHSEKEEDEEIIREALEDEE
ESYQGVLLTSSPKFIENTTLRSYQIDGVNWMIRLHDRGVNGILADEMGLGKTVQTLTWIA
YLKFIRRIRGPHLVIVPKSVIPNWVNQANQWCPSLQVLKFHGDKDQRREIKEKSLVGGKF
EIVVTSYETAIKEKAALNKFRWYSIIIDEAHRIKNENSILSQSVRVFDCQYRLLLTGTPL
QNNLHELWSLLNFLLPDVFRSADDFDTWFNLKEGQAETHIIDQLHKVLKPFLLRRLKTEV
KTDIPPKKEIYVECGLSKLQKEWYRSILTKDLNSIKGGEKVRLLNVVMQLRKCCNHPYLF
DGAEPGPPYTLGDHLMNNSGKMYLVDKLLKKLKEQNSRVLIFTQMTRMLDILEDYCYLRN
YEYCRIDGQTSSELREQHMDEFNKEGSSKFIFLLSTRAGGLGINLATADTVIIYDSDWNP
QADLQAQDRCHRIGQKKPVNVYRLISKDSIEEKIYQRAVKKLYLDAVVIQQGRLAEQNNK
LSKTELMSMIKFGAEEVFKSTESTITDEDLDAILSRGEQKIQEIDQQYKNICQNNLLNFS
LTNENNLYEFEGLDYSKKATTMISLEKLVSKNYKAKFCKKNDKFILQLEEEALKEESQTV
RSERLGRRNKQTEQQIAIEEAQQKRGPKEPKYYDFQFLNTKRLLELWEKETQFEQEKKKR
KKNKDSDEKEDEEAGELTKEEKSEKRKLLLEGFNNWSKKDFQSFIKGCEKFGRKDYANIA
VEVEKTEQQIKKYSNVFWKRYKEIKDYDKLIKRIERGESQLQKIDNNNLMLRYKTQKYIN
PWLEMKFNYGQNQVKEFTPEEDSFICCMTAKLGYGFWEEVRAQIRNAWEFRFDWFIKTRT
AVEIQKRCDTLIKLIEKEYQDELKVQEKEKSKRKLEPSASGNSTKKVKK
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcggatgcggaagaagcagcacctcctaaaaaaacaacaaaaaggagaact
cctgctagaagatctcgtgctaaaaaggatgaagatgaagaagaacaacaagaatcttct
gaggaagaagaagaagaagaagaagaagataatgataaaagtggaaattatcgtggagaa
ggtgaggaatcatcatctgaagaagagagtgaagaaccacaagaaaagtaccaatttatt
tcggaacaaacaagtaaacatttagagaaaatcagaaaggaacaaaaatctcttcttaac
agattaaaagagaaacaaaagaaagaactagttggtattgaagatccacaagaaaaagtt
aaagtgacatttagacatttgttggaacaaacagaaatttactctagtttcactccaaat
ttatctatgcatacaattattgatggaacttcatcttcaaagaaaggaggatctagaaga
aaacactctgaaaaggaagaggatgaagaaattattcgtgaagccttggaggatgaagaa
gaaagttatcaaggtgttttacttacatcatcaccaaaatttattgaaaatactacattg
agaagttatcaaattgatggtgtaaattggatgattagacttcatgatagaggtgtaaat
ggaattttagctgatgaaatgggtcttggtaaaactgtacaaactcttacttggattgct
tatttgaaatttattagaagaattcgtggtcctcacttggttattgtaccaaaaagtgtt
attcctaactgggtaaatcaggctaatcagtggtgcccatctctacaagttcttaaattc
cacggagacaaggatcaaagaagagaaatcaaggaaaaatcacttgttggaggaaaattt
gaaattgttgtaacttcatatgaaacagctatcaaggaaaaggcagctttaaacaaattt
agatggtatagtattatcatcgatgaagctcaccgtattaagaatgaaaattctatcctt
tcacaatcagttagagtttttgattgccaatatagattattattaacaggtactccactc
caaaataaccttcacgaattatggagtttacttaactttttattgccagatgttttccgt
tcagcagatgattttgatacatggtttaacttgaaggaaggtcaggctgaaactcatatt
attgatcaattgcacaaagttttaaaacctttccttttgagaagattgaaaactgaagtt
aaaactgatattcctcctaagaaggaaatttatgtagaatgtggtttatctaaacttcaa
aaagaatggtatcgtagtattcttacaaaggatttgaactctatcaagggtggtgaaaaa
gttagacttttaaacgttgttatgcaacttagaaagtgttgcaaccatccatacttgttt
gatggtgctgaaccaggtccaccatatactctaggtgatcacttaatgaataactctggt
aaaatgtatctagttgataaactattgaagaagttgaaggaacaaaactctagagtatta
atctttactcaaatgacaagaatgttggacattttagaagattattgttatttaagaaat
tatgaatattgtagaatagatggtcaaacatcaagcgaattgcgtgaacaacatatggat
gaatttaataaggaaggaagttcaaagtttatcttcttgttgtcgacacgtgctggtggt
ttgggtattaaccttgctacagcagatactgttattatttatgacagtgattggaatcct
caagctgacttgcaagctcaagacagatgtcacagaattggtcaaaagaaacctgtgaat
gtgtatagattaatttccaaagactctatagaagaaaagatttaccaaagagctgttaag
aaactttatttggatgctgtggttatccaacaaggtagacttgctgaacaaaataataag
ctttcaaagactgaattgatgtctatgatcaagtttggtgctgaagaagtttttaagagc
acagaatcaactattacagatgaagatcttgatgctattttatcacgtggtgaacaaaag
attcaagaaatcgatcaacaatataagaatatctgccaaaacaatttgctaaacttctca
ttgacaaatgaaaataatttgtatgaatttgaaggtctagattattcaaagaaggcaact
acaatgatttctttagaaaaacttgtctctaaaaattataaggccaaattctgtaaaaag
aatgataaatttattctccaactcgaagaagaggcccttaaggaagaatctcaaactgtt
agaagtgaaagattgggaagaagaaacaagcaaacagaacaacaaattgctattgaagaa
gctcagcaaaaacgtggtccaaaagaaccaaaatattatgatttccaattcttgaacact
aagagattgttagaactttgggaaaaggaaacccaatttgaacaagaaaagaaaaagaga
aaaaagaataaggatagtgatgaaaaagaagatgaagaagcaggagaacttaccaaagaa
gaaaagtctgaaaagagaaaacttctccttgaaggatttaataattggagcaagaaggat
ttccaaagctttatcaagggttgtgaaaaattcggaagaaaggactatgcaaatattgca
gtagaagtcgaaaaaactgaacaacaaattaagaagtattctaatgtattttggaagaga
tataaggaaattaaagattatgacaagttgatcaagagaatagaaagaggagaatctcag
ttacaaaaaattgataataataatttaatgttaagatataagacacaaaaatatatcaat
ccttggttagaaatgaagttcaactatggtcaaaatcaagtgaaagaatttactcctgaa
gaagatagttttatttgttgtatgactgcaaaattgggatatggattttgggaagaagta
agagcacaaatcagaaatgcttgggagtttagatttgactggttcattaaaactagaact
gcagttgaaattcaaaagagatgtgatactctcatcaaactcattgaaaaggaataccaa
gatgagcttaaagtccaagaaaaggaaaaatccaagagaaaattggaaccctcagcttct
ggaaattcaaccaaaaaagtcaaaaaataa
DBGET
integrated database retrieval system
