Naegleria gruberi: NAEGRDRAFT_60928
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Entry
NAEGRDRAFT_60928 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_60928
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_60928
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
Pre-60S particles
Helicases
NAEGRDRAFT_60928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Cas3-like_C_2
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
8858090
NCBI-ProteinID:
XP_002671341
JGI:
Naegr1_60928
UniProt:
D2VXB0
LinkDB
All DBs
AA seq
620 aa
AA seq
DB search
MSPVQENTIPLLLNNKDVVVQALTGSGKTLAFIIPIFQYIIARQFEGKIPSMEEMMPRRK
NVYSIVLLPTRELARQVYDVACKFAPKTNLNVKLFIGGEERETLQPATGFDSSEKSGLNA
SENLFLDCNIAIGTPGRILDYLNSKLLKVRCLEILIIDEADIILNMGFRQQVDQILSHLP
KQRRTGLFSATQTSELDDLVRSGLRNPMKVAASEHAENKKKATVPSQLANFYMYCDYRQK
LNYLIHLIKNDDPIPSGNSVIVYFLTCAAVDFFSKLLKEVLGKNEETIQLFSLHGQMVQK
RRNAEHQSFKEACENIAKQLDQSVVSKKAVLFCTDVAARGLDFPNIATIVQFDAPTNPDQ
FVHRVGRTARMGKEGQSLLFLSKPEHDYIDYLTFKKISMHELEPTDEMKKTNYVNKDVLK
KIIKSDRDVFEKGEEALKSFVRSYKEHQCSYIFKFAKLRFDQLLEAYCILTKPTIREIKQ
QMESIKLPFEDIDINSIPYKDARREKARKERLKKQEENEKIWEEKRLQKIAEKKEEKKSS
VNYLKDKVRNRSDISTHEKKRLYNQLENQQFNDEALLLKRLKRGKISEEEYERLSGESKL
EGEIMKKLSERKRKQLQKRK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgtacaagaaaatacaattcccttgttactaaataataaggatgttgtagtt
caagctctcactggttcaggaaaaactcttgctttcattattccaatatttcaatatatt
atcgcaaggcaattcgaaggaaaaatacctagtatggaagaaatgatgccaagaagaaag
aatgtctattcaattgtgttattaccaacaagagagttggcaagacaggtttatgatgtt
gcttgtaaatttgcgccaaaaactaatctcaatgtcaagttgttcataggaggagaagaa
agagaaactctgcaacctgccactggttttgattcctcagaaaagtcaggtttaaacgca
agtgaaaatttatttctggattgtaatattgccattggaactccaggtagaattttggat
tatttaaactctaaactattgaaagtgaggtgtttggaaattttaattattgatgaagct
gatattattttaaatatgggatttagacaacaggttgaccaaattttgtcacatcttcca
aaacaaagaagaacaggtctatttagtgcaactcaaacaagcgaattagatgacttggtt
agatctggattaagaaatccaatgaaagttgccgcaagtgaacatgctgaaaataagaaa
aaggcaacagtcccttcacagcttgcaaacttttacatgtattgcgattatagacaaaaa
ctgaattatttgatacatcttattaagaatgatgatcctataccgagtggtaattctgta
attgtttattttttgacatgtgctgctgttgattttttttccaaattgttaaaagaagtg
ttagggaaaaacgaagaaactattcaattattttctcttcatggccagatggtacaaaag
agaagaaatgcagaacatcaatcattcaaggaggcctgtgagaatattgccaaacaactc
gatcaatcagtcgtatcaaagaaagcagtcttgttttgtacagatgttgctgccagaggt
ttggatttcccaaatattgctaccattgtacaatttgatgctcctactaatccagatcaa
tttgtgcatcgtgttggaagaacagctagaatgggtaaagagggtcaatccttactcttc
ttgtctaagccagagcatgactatattgattatttgacattcaaaaagattagtatgcac
gaattggaaccaacagatgaaatgaaaaagaccaattatgtgaataaggatgttctcaaa
aagattatcaaaagtgatcgagatgtctttgaaaaaggtgaggaggcactcaagagcttt
gttagatcttacaaggaacaccagtgttcatatattttcaagtttgccaaattgagattt
gatcaattattagaagcctactgtattttgacaaagccaaccattagagagattaaacaa
caaatggaatcaatcaaattaccttttgaagatattgatattaattctattccatacaaa
gatgctagaagagaaaaggcaagaaaagaaagactgaaaaaacaagaagagaatgaaaag
atttgggaagaaaaaagacttcaaaaaattgcagaaaagaaagaagagaagaaaagttca
gttaactatctaaaagacaaagttagaaatcgatcagatatttcaacccatgaaaagaaa
cgactgtataatcaattagaaaatcaacaattcaatgatgaagctctattactgaaaaga
ttaaagagaggaaaaattagtgaagaagaatatgaacgtttatcaggtgaatctaaattg
gaaggagaaataatgaaaaagctttcagaaagaaagagaaaacaacttcaaaagagaaaa
taa
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