Naegleria gruberi: NAEGRDRAFT_61097
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Entry
NAEGRDRAFT_61097 CDS
T01241
Name
(RefSeq) sister chromatid cohesion
KO
K06672
cohesin loading factor subunit SCC2
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_61097
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
NAEGRDRAFT_61097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cnd1
SCD
Cohesin_HEAT
RasGEF_N_2
TPR_TNPO3_IPO13_3rd
GNC1_N
RTP1_C1
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
8863736
NCBI-ProteinID:
XP_002683017
JGI:
Naegr1_61097
UniProt:
D2UXE8
LinkDB
All DBs
AA seq
1388 aa
AA seq
DB search
MSSNNNRIPLSNNGSRFIDAFLPPFCAQFSIINEMPPLTVKEQPIFKNIDHPSKDLYTYN
LLQCPHHKEEVIKWLDTNDENLVEGLYNVLTSKPRMDDEIILNSNGGSLVQQDLNNNSKN
SVLLSSLLKFQEDKENRPINPSPVSYDLYKKSLQKETPKVTSNTTPIKIRKARRNKKLID
EVETQEKPSSTVSNGQPSKLVINAKLAPKTTSVEKLIGALDELFAWSDFRQSEDELVEEK
FLKDVEVEIGLAHKNNYLKEVPTEKLIKLLSVLESQVNVGLELVKVVSETSREELVESLK
QDKDSISKASRCAILSFTVMSGRGVSKETLNEECFETILDFTKTVLRKYIYPIVESEEAP
KKKTSRKYSCNSEMIQLCKIFKKLDKILRKQSLKDEFILTISDIVVSTFFVNGIDDIQLA
SLGVITKIFSSYPDHREQILGEITVSLLRLPANKKTDRRFRIPETSIHIQMFTSLMLQLI
HSCTDIKRNETSVARKLIFDNVENNSDDDQDDDIMKDSTPESEDIIITTYEQAVRCATTF
SEYFLERCTKSESVDGDNRLIIEHFVEDLLVVLPLPSWPAADLLLQALANILCNKYLSQK
DIADKYRQLALKILGKLAARIKELEFKNLQFMKDYMLTMECVQDNNGETSNTMELHTTKL
QDEFKTLFELDEIDKMKLSLFTYLNMKQKDYPMISYSKQFTIAQWFYDEREIEKKAPFYK
TLLLRDDTDTVNTPLQDVESQNLYINILCNRNSSIINKFDFVFGQIISELKDDKPKVRAD
AIKALQTVINMDSSVLMKNYVQLGIRERTVDAFPSVRESVIDLIGNAMITLKRYEDFYIR
IILDRVKDTSKSVRKKSITILGELCSLITEDNMITEICKTLASRLSHQNKEEDNIKELVL
KTFTKLWFDKNTTEKFKLSGLQIVDVIGKQAIDFKQYKDHWLYQIINLASMSKDHEKIQT
SLKMIIETLIQHVIKLDSEEKKATSPSELFNRFNIVTCMSALHLICLADHSLFLSHFRNI
SVSDTNLQSEARTCRLLYAAALFCRYHDFDSTSDMIENITNQNLKPGKIVQTIYSITIGW
ISKSSELIKQKAARSLGFLLIRQPKLFLVKQTQTAISQSLSSENRDFVYEVVLMFKDFLL
AEESKLSSATHQENMDAGVTSTLMLSYIDALIALLDDTTDYIRHATLEVLELTVQQGLTI
PSKIMKYTLAMESDPNSDVREKAHTINLYLKDRFLKMFTSEARHSFSKAFMHLNNINEKS
VIVKGIIDGKSAFHGIYSFLYEVAEIVTTLGEKLDMLGDSVKEELKNQIKNEEKELKYVR
KYITLSCCLCFLIQFKNTLQVRYNLTNSKMEEYSADSKSFIKKIITSSSIRDVSLLKLSQ
VKTMKMKQ
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaataataatcggatacctttatcaaacaatggatcaagatttattgatgcc
tttcttcctcctttttgtgcccaattttctattatcaacgaaatgcctccactgactgtc
aaagaacaaccaatattcaaaaatatcgatcatccatccaaagacttgtacacttataat
ttattacaatgtcctcatcacaaagaggaagtaattaaatggcttgataccaatgatgaa
aatttagttgaaggactttataatgttctcacttcaaaaccaagaatggatgatgaaatt
attttaaactctaatggtggtagtttagtacaacaagatttgaataataatagtaagaat
tcagtacttttgagttcactcttaaaattccaggaagataaagaaaatcgaccaatcaat
ccttcacctgtatcatatgatttatataagaaatctttacaaaaagaaacaccaaaagtt
acttctaatactacaccaatcaagattcgtaaagctagaagaaataagaaattaattgat
gaagttgagacacaagaaaaaccatcttcaacagtatctaatggtcaaccttcaaaacta
gtaattaatgcaaaacttgctccaaaaacaacaagtgtcgaaaaacttataggagcactt
gatgaactttttgcatggagtgactttagacaaagcgaagatgaattggtggaagaaaaa
tttcttaaggatgtagaagttgaaataggcttggctcataaaaataattatttgaaagaa
gtacctacggaaaaattaattaaattgttaagtgtgctagagagtcaagttaatgtagga
ttagaattagttaaagtagtatcagaaacttcaagagaagaattagtagaatctttaaaa
caagataaggatagtattagtaaggcttcaagatgtgctatactatcatttactgttatg
tctggtagaggcgtttctaaggaaactctaaatgaagaatgttttgaaaccattcttgat
tttaccaaaacagttttgagaaaatatatttatcctattgtagaatcagaagaagctcca
aaaaagaaaacaagtagaaaatacagttgcaattcagagatgattcaattgtgtaaaatt
ttcaaaaaattagacaaaattcttaggaaacagtctttgaaagacgaatttattttaaca
atatcagatatcgttgtttctactttctttgtaaatggtattgatgatatacaacttgca
tcattgggtgttattacaaaaattttctcttcttatccagatcacagagaacaaattctt
ggtgagataacagtttctcttttaaggcttccagccaacaagaagactgacagaaggttt
agaataccagaaacttcaattcatatccaaatgttcacatctcttatgcttcaattaatt
cattcatgcactgatatcaaacgaaatgaaacttctgtagcaagaaaactcatctttgat
aatgttgaaaataattcagatgatgatcaggatgatgatattatgaaggactcaactcct
gaatcagaagacattattattactacatatgaacaagctgttcgttgtgccacaacattt
tcagagtatttcttggaaagatgtacaaaatcagaatctgtggatggagataatagacta
attattgaacattttgtggaggatttactggtggttcttccattgccatcatggccagca
gcagatcttttacttcaagcgttagctaacattctttgcaataagtatctctctcaaaaa
gatattgctgataagtatagacaattggctttaaaaattttgggaaaacttgctgctaga
attaaagaacttgaatttaaaaatttacagttcatgaaggactacatgttaacaatggaa
tgcgtacaggataacaatggtgaaactagtaatactatggagttacatactaccaaattg
caagatgagtttaaaactttatttgagttggacgaaattgacaagatgaaactttcgcta
ttcacatatctcaatatgaagcaaaaagattatccaatgatttcttattctaaacagttt
acaatcgctcagtggttttatgatgaaagagaaatagaaaagaaagcaccattctacaaa
actttattattgagagatgatactgatactgtaaacacacccctacaagatgtcgagtca
caaaatttatatattaatattctttgtaacagaaattcaagtatcattaacaagtttgac
tttgtctttggccaaattatttcagaactgaaggatgacaaaccaaaagtccgcgcagat
gctatcaaagctttacaaacagttattaatatggattcatctgtattaatgaaaaattac
gtacaacttggaattcgtgaaagaactgtagatgcattcccttcagtgagagagtctgtt
attgatttaataggaaatgctatgataactctgaaaagatatgaagatttttatatcaga
ataatattagatagagtcaaagatacatcaaagagtgttagaaagaaaagtattacaatt
ctgggagaactttgttccttaattactgaagataatatgattacagaaatttgtaaaact
ttagcaagtagattaagccatcaaaacaaggaagaagataatatcaaggaactagtttta
aaaaccttcacaaagctatggtttgataaaaataccacagaaaaattcaagctaagtggg
cttcaaattgtggatgttataggaaagcaagcaatagattttaaacagtacaaagatcat
tggctctatcaaattattaatttggccagtatgtcaaaagatcacgaaaaaattcaaact
tctcttaaaatgataattgaaactcttatacaacatgtaatcaaattggatagcgaagaa
aaaaaagctacatcgcctagcgagttattcaataggtttaatattgtaacttgtatgagt
gctttacatttgatttgtctagctgatcattctttatttctttctcactttagaaatatt
tctgtgtcagatactaatctgcaaagcgaagcaagaacttgcagattgctttatgcagca
gcactattttgcagatatcacgactttgatagtacttcagatatgattgaaaatattacc
aatcaaaacttgaaacctggaaaaattgtacaaactatttacagcatcactattggctgg
atttccaaatcgtctgaattgatcaagcaaaaagcagccagatctttaggattcttattg
ataagacaacctaaacttttcttggtaaagcaaactcaaactgctatttcacaaagcttg
tccagtgaaaatagggattttgtctatgaagttgtcttgatgtttaaagactttttactg
gctgaagaatcaaagctaagctccgctacccaccaagagaatatggatgccggtgtaaca
tcaactttaatgttaagctacattgatgcattgattgctcttttagacgatactactgat
tatattaggcatgccactctagaagttttagaattaactgtacaacaaggattaactatt
ccttcaaagataatgaaatatacattggcaatggaatcagatcctaatagtgatgttaga
gaaaaagcccatactattaatttataccttaaagacagatttttaaaaatgtttaccagt
gaagccagacatagtttttcaaaggcatttatgcatttgaataatattaatgagaaatct
gttatagtgaaaggaataattgatggtaaaagtgccttccatggtatttattcattcttg
tatgaagttgccgaaattgtaactactcttggtgaaaaattggatatgttaggagatagt
gtgaaagaagagcttaaaaatcaaatcaaaaatgaggaaaaggagttgaaatatgtcaga
aaatacattacactatcatgctgtttatgtttcttgattcaatttaaaaacacactccaa
gttagatataatttgacaaattcaaagatggaagagtattctgcagattcaaagtccttc
atcaaaaagattattacatcctcctctatcagggatgtttctcttttaaaactatctcaa
gtcaagactatgaagatgaaacaatag
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