Naegleria gruberi: NAEGRDRAFT_61290
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Entry
NAEGRDRAFT_61290 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14303
nuclear pore complex protein Nup160
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_61290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_61290
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_61290
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
NAEGRDRAFT_61290
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
NAEGRDRAFT_61290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
Motif
Other DBs
NCBI-GeneID:
8863939
NCBI-ProteinID:
XP_002683452
JGI:
Naegr1_61290
UniProt:
D2UXZ2
LinkDB
All DBs
AA seq
1498 aa
AA seq
DB search
MVNSYYYENMLKSAHFHDNVGVQCDSGSFSFVDNNLEKNLVWQTIGGDLVLHELDFKATS
CTKTLVIKSPENSIFLPGTSIKQTSRGIVIWLLSSNRTLFCLSINKKEKSFIEGITENNL
QVDSFNIGTSDQEIEGTYNRLQQKSIFNGLFGSGSQDSNNMEFFKTYSEHFPTCLCAIDS
QAVIVGLANGNLLRIIRDGSNFIHNTFLFETSSSWNWFSNKSSEKNLKEVFKNLTVSVQH
LSLYENQLNIIASLHRDGSLLIWKEDSDTSVSLGREILPANNLKLLKINLHNDGINDINF
CSLPLKITKESDDSTFQIIASGTQNDRTQFTVFGFQTFSEDNSFDITYNGVENVKCFSSE
FLPKDIFSVERERKNLFSNLISYSLYNGTVWGIWSIRDYTSNLEENANISYTIAYGSLLS
DSCQPSAWCFARTLHSQLSSGVSKFYGNVYSNSKNIGSYVEQFLFTSTTRLQLNSNLLFR
SIVPFYPKDSLHSLTLELGITEDKPLIPFTYINDAYWSDKIKYAIEYTISQKRAEITTKD
LLERNVLESKIEIQTWLEFLQTLARISSLNQPTGFVFMNSTPAVMYNQSICLLRQLDILE
SIQQTANQSLRGSRNYLLLANNLEIKESISKRSTFSRDLVEFFRILNFIDKSASELLSTF
TVLPYYFSQESTNDNPAIIARKMATELVSGLSNHNSDTPDTLIKDFKQSHHKKLFVNGLI
DRMSAIRNTPVSSILNYIIRTLMVSEIESKKDLISMDNSILIQLINASSIQILESRYQLL
CQLCIFIEIAGLLTLNGENNNIEANTCYSLLRSYHLAWWLCNRIVESSTNSLNLAVSLSN
SKLNMADFLLTHPSPTIDTKYFIEMLLTEHEVKKKLQTNLEQPPLSYLVTNISLMIIQRV
ILVDYESNKAQRNTVEIAQYLLNWQAYGALKRYCLLLQSYDSSFPLTYHYLALANLQEGD
LSRAKQNFLRCAIIGVSNRERDQETLALFKLMNIYWKVEPTLNNQTIEDRVKISLLFYYY
NYIRQLCEKHPELALEFINLSLTEADSDLIPTEEISILYSVLFSLCIHFERFDMAYVSLN
SQNDIQRKKSDLRKFVGTLCDLAAYSTEQCKYFGNMLCELPFSGSRNDVNDLLHERAKYA
DLSIRLANIGTSHVKVLCTNGSRSGNYTLLEEHTQKLNTVFTYYHLLYSYNIHRGDYNKA
AMYIYELGRRIESQIRIVPFSATPNDCHAEILEAYLQKQTECFLIALNALKTVSENNQWF
LYPRSDEESMDRAISPLKRIRDDQMQVEQDLTFTKPHIITLSHLEKRYQLSSSKLFILQA
QKKTPSFNILSLVLLSNPIDIISQFLSGNYETVEKAFMVASACKLTTPEMCILFSKLTKK
CCESGDINTSGTSKKMWNLLRMKLNKYNNASTGYLFASSAIRTIYQELQSGYIQREECYL
PNWLVKQCDPNSLLRIYLEFGKISEAQKLLVQKSMESDSSPLLTLPISQTLVEYVVKQ
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggttaattcttattattatgaaaatatgctcaaatctgctcattttcatgataatgtt
ggtgtgcaatgtgattctggaagtttctcgtttgtggataataatttagagaaaaatttg
gtttggcaaaccattggtggagatcttgtattacatgaactagattttaaagccacttca
tgtaccaaaactttagtcatcaaatcacccgaaaattcgatttttctgccaggtacatcc
atcaagcaaacttcaagaggaatagtaatttggcttttatcttctaacagaacattattt
tgtttgagcatcaacaagaaagagaagagttttattgaaggaattacagaaaacaatctt
caagttgactcatttaatattggtacttcagaccaagaaattgaaggaacctacaataga
ttacaacaaaaatctatctttaacggattatttggaagcggatctcaggatagcaataat
atggagtttttcaagacttattctgaacattttccaacttgtctttgtgcaattgattca
caagcagttattgtgggtctagctaatggcaatcttttaagaattattagagatggatca
aattttattcataacacttttttgtttgaaacctcatcttcttggaactggttttcaaac
aaatcttctgagaagaatcttaaagaggttttcaaaaatcttacggtatcagtacaacat
ctaagcctttatgaaaatcaactcaacattattgcctctttgcatagggatggaagcctt
cttatttggaaagaagatagtgacaccagtgtctcactgggtagagagatacttccagca
aataatttgaaacttttgaaaattaatcttcacaatgatggaattaatgatattaacttt
tgttcccttcctctaaaaataacaaaagaaagtgatgattcaacattccaaattattgca
agtggcacacaaaatgatagaacacaatttacagtatttggttttcagacatttagtgaa
gacaattcatttgacattacatataatggagttgaaaatgtcaagtgtttttcttcagaa
tttcttccaaaagatattttctcagtagagcgggaaagaaagaacttattttccaatctt
attagctattctttatataatggtactgtatggggtatttggtcaattagagattacaca
tctaacttggaagaaaatgcaaatatttcatatactattgcctatggttctttattgagt
gattcttgtcaaccttctgcttggtgttttgcccgtacattacattcacaattatctagt
ggagtatctaagttttacggaaatgtttatagtaattcaaaaaatattggctcatatgtg
gagcagtttttatttacctctacaactagattacagttaaattcgaacttattattcaga
tctatagttccattctatccaaaagatagtttacattctctaacgctagaattaggcata
accgaggataaaccattaattccctttacttatattaatgacgcatactggtcagacaaa
atcaaatatgccattgaatacaccatttcacaaaaaagggcagaaatcacaacaaaagat
ttattagagagaaacgttcttgagtctaaaattgaaattcaaacctggttggaatttttg
caaaccttagcacgtatatcaagtttaaatcaaccaactggctttgttttcatgaattcc
acacctgccgtaatgtataaccaatcaatttgtttgctccgtcaacttgatatactagaa
tctattcaacaaacagccaatcaatctttgaggggaagtagaaactaccttcttttggct
aacaatttagaaatcaaagaaagtatctccaaacgatcaacattctctagggaccttgta
gaattctttagaattttgaactttattgataagtcagcatctgagttattatctaccttt
actgtactaccatactatttctcacaagagtctacaaacgacaatcctgcaataattgcc
agaaaaatggctacagagcttgtttctggtctttcaaaccataacagcgacacgccagac
actctcatcaaagactttaaacaaagccatcacaagaagctttttgttaacggattaatt
gatagaatgtcagccattagaaatacacctgtatcctctattttgaattacataatacgt
actttaatggtttctgaaatagaatccaagaaggacttgatttcaatggataactctatt
cttattcaattgattaatgcttcttcaatacaaattttagagtcaagatatcagctcttg
tgccagttatgcatttttattgaaattgctggtctattaactttaaatggagaaaacaac
aatattgaagcaaacacttgctactccttacttagaagctaccatttggcgtggtggctt
tgcaatagaattgtagaatcaagcacaaacagtttaaacttggctgtctccctttcaaac
tccaaactgaatatggctgattttcttctcactcatccttccccaaccattgatactaaa
tattttattgagatgttattgactgaacacgaagttaagaaaaagttgcaaacaaatcta
gaacagccacccctttcctatcttgtaactaatattagcttgatgataattcaacgtgtt
attttggtggactatgaaagcaacaaagcccaaagaaacactgtagaaatagcccaatat
ctattaaattggcaagcatatggcgctttaaagagatactgcttgctccttcaaagttat
gactcttcattccctctcacctatcattacttggcccttgcaaatttacaagagggggat
ctatctcgagcaaagcaaaactttttgcgatgtgcaattattggtgttagtaatagagaa
agagatcaggaaacattggcattatttaaactgatgaatatttactggaaagttgaacct
actttgaataatcaaacaattgaagatcgtgtgaaaatatctcttcttttctattactat
aattatattaggcagttatgtgaaaagcatccagaattagctttggagtttatcaatctc
tccctaacagaagctgacagtgatttgatacctacggaagagattagtattttgtatagt
gtactattttctctctgtatacactttgaacgctttgacatggcatatgtttctctaaac
tcacaaaatgatatccaaagaaagaaatcggatttgagaaagtttgtgggtactctttgt
gatttggctgcctatagcaccgaacaatgcaaatattttggtaatatgctctgtgaacta
ccatttagtggaagcagaaatgatgtcaatgacttacttcatgaaagagccaaatacgct
gatctcagtattagacttgccaatatcggcacatcccatgttaaggtattgtgtacaaat
ggatccagatcaggaaattacacacttctagaagaacacacacaaaaactaaatactgtt
ttcacttattatcatctcctttactcttacaacattcatagaggagattacaacaaggca
gcaatgtacatttacgaattgggaagaagaatagaaagtcaaataagaattgttccattt
tctgcaactcctaacgattgtcatgctgaaattcttgaagcctatcttcaaaagcaaact
gaatgcttcttgattgctctcaatgctttgaaaactgtttcagaaaacaatcaatggttc
ctttatccacgcagtgacgaagaatccatggatagggcaattagtccactaaaaagaatt
agagatgatcaaatgcaagttgaacaagatttgacatttacaaaacctcacattattact
ctatcgcatctggaaaagaggtatcagctatcatcatcaaagctttttattcttcaggcc
caaaagaaaactccttcatttaacatactttctctcgtacttttgagtaatccaatagat
attatttcacaattcttatctggaaattatgaaactgttgaaaaagcttttatggtagcc
tctgcatgtaaattgactactccagaaatgtgtatcttgttctcaaaattaaccaaaaaa
tgttgtgaaagtggtgatattaacactagtggtacttctaagaagatgtggaatttactc
agaatgaagttgaacaaatataataatgcatctacaggttatttatttgcctcttccgca
attagaactatttatcaagaattacaaagtggatacattcaaagagaggaatgttactta
ccaaactggctggtaaaacaatgcgatcctaattcgttgttgaggatttatttggaattt
ggaaagatttctgaagcacaaaaactattggtacaaaaatcaatggaatcggactcttcg
cctttactgactcttccaatttcccaaacattagtagaatatgttgtaaagcaataa
DBGET
integrated database retrieval system