Naegleria gruberi: NAEGRDRAFT_61327
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Entry
NAEGRDRAFT_61327 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
ngr
Naegleria gruberi
Pathway
ngr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NAEGRDRAFT_61327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_61327
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
NAEGRDRAFT_61327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
WD40_CDC20-Fz
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
WD40_Prp19
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_like
RMC1_N
CNH
Motif
Other DBs
NCBI-GeneID:
8863961
NCBI-ProteinID:
XP_002683468
JGI:
Naegr1_61327
UniProt:
D2UY30
LinkDB
All DBs
AA seq
777 aa
AA seq
DB search
MKKVATPNSSKKRKHQQQHSSAKKVLESTPREDEVSEPTSANTTAKYGDKIITTTTNNNN
TIEHVEEKKVKREHQPTTHRNSSFIVDELNVTKNIHISAIKRLCFNPTQSLLAVARFNSE
IEIWSIDGQKSSVDTNRPIENCTLIKRLPGKIGTTIESIIWTGDNRLFTAGLHGMITEWD
LERQSPKRISTSVLGGAIWSMDHCAEKNLIAIACEDGAVRLINDEDLSLKFFLAPSRTNE
PPSGKKYKHCENSHRMLTTKIIDGGNKVLVGGMTGVYCFDLNKRTLVYKISLKNSFCWCM
EILNDSIMVVGDSEGNIHFCDYRLGAIVNSVKGHDGDVLRICIQKPGVIYSTGVDGSISM
YKEVGKKYVSVIKKRPSLHDLLDMVYCEKEKSLYFGGLNCAILRMKTEIFYRQQDLKDKI
FDRIRIKPNRDLLKVATGSRLALYDNLANQITLLKLPESNIENRQVSLNDPASILMQVKI
KSKGNWYSSMSDISPNGKHISVASVDCTYLITLATDENGGVSLENKINLSDKEYNVVPGH
YTAFAGNNHLLIASRDCSTLQLFNIEKKTVQSIHLPSSKIDSSLENENSPFRVFSNSING
LIANEKYVIVSKGNLVLCYRLESLISENNKVHFEIELPTHNGFIYKIGFLNPCDSVCPAF
YSLSNPNTITVFDANKRRTIISPLSFPTEKLNQAVISSLHQLSLKYYLVTSLTRCFLLDS
STLEIKDYVLANRLGKTEDMIGFSSVCGNELIMASFDYNTHTEELLPPVIDRKRFGT
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagttgcaacaccaaactcctcaaagaagagaaagcatcaacaacagcattct
tcagcaaaaaaggttttagaatcaactcctcgtgaagatgaagtgagtgaaccaacatca
gcaaacacaacagcaaaatatggagacaaaattattacaaccactactaacaacaacaac
acaattgaacatgttgaagaaaagaaagtaaaaagagaacatcaaccaacaacacatcgt
aatagtagttttattgttgatgaattaaatgttactaaaaatattcacatttcagctatt
aagagactttgttttaatcctactcaatcacttttagctgttgctaggtttaatagtgaa
attgaaatttggtcaattgatggtcaaaaaagtagtgtagacactaatcgtccaattgaa
aattgtactcttattaagagattaccaggaaagattggaactacaatagagtcaataata
tggacaggagataatagacttttcacagcaggtctccatggaatgattacagagtgggat
ttggaaagacaaagcccgaagagaatttctacttcagttttgggaggtgctatttggagt
atggatcattgtgctgaaaagaatttaattgctattgcttgtgaagatggagcagtaaga
cttattaacgatgaagacttgagtttgaaattcttccttgcaccttcaagaaccaatgaa
ccacctagtggaaagaaatataagcattgtgaaaatagtcatagaatgctaaccacgaag
attattgatggaggtaataaggtacttgttggtgggatgaccggagtttattgttttgac
ctcaataagagaacacttgtctacaaaatttccttaaagaactcattctgttggtgtatg
gaaatactcaatgatagcattatggttgttggtgattctgagggaaatattcacttttgt
gactatcgtttaggagctattgttaactcagttaagggacatgatggtgatgtattgaga
atttgcatccaaaaacctggtgttatttattcaacaggtgttgatggaagtatttccatg
tacaaagaagttggcaagaagtatgtctctgtcattaaaaagagaccatccctccatgat
ttattggacatggtatattgcgagaaggaaaaatctctttactttggaggtcttaattgt
gccattttgagaatgaagactgaaattttctatagacaacaagatttaaaggataaaatc
tttgacagaataagaatcaaaccaaacagagatttgctaaaagttgctacgggttcaaga
ttggctctttatgataatttggctaatcaaattacacttttaaagttgccagaatctaat
atcgagaatagacaagttagtttgaatgacccagcctcaattttaatgcaagtcaaaatt
aaaagtaagggtaactggtatagttccatgtcagacatttcaccaaatggaaagcatata
tctgtcgcttcagttgattgcacttatttaataacacttgccacagatgaaaatggagga
gtttctttggaaaataagattaacctttctgataaggaatataatgttgtacctggtcac
tatacagcatttgcaggaaataatcaccttttaattgcatccagagattgttcaactctt
caattatttaatattgaaaagaagacagttcaatcaatccatttaccatcctcaaagatt
gattcatcactcgaaaatgaaaactcaccattcagagtattttcaaattccattaatggc
ttgattgctaatgaaaagtatgtgattgtatcaaaagggaatcttgtactgtgttataga
ttggagagtttaatctctgagaataataaggttcattttgaaatagaattaccaacacat
aacggatttatatacaagattggctttttaaatccatgcgatagtgtgtgtcctgccttt
tattctctctccaatccaaataccattactgtctttgatgctaacaagcgtagaactatt
atttctccattgtcattccctactgaaaaattgaaccaagcagtaatcagttctcttcat
caactttcactcaagtactatttggttacctctttgactcgttgcttccttctggattcc
agtactcttgaaattaaggattatgttttagcaaacagattaggaaagactgaagatatg
attggattttcatctgtttgtggtaatgagctgataatggcttcattcgattacaatact
cacacagaagaacttttaccacctgttattgacagaaaacgtttcggtacataa
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