KEGG   Naegleria gruberi: NAEGRDRAFT_61327
Entry
NAEGRDRAFT_61327  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
ngr  Naegleria gruberi
Pathway
ngr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    NAEGRDRAFT_61327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ngr03009]
    NAEGRDRAFT_61327
Ribosome biogenesis [BR:ngr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    NAEGRDRAFT_61327
SSDB
Motif
Pfam: WDR55 WD40_CDC20-Fz Beta-prop_EML WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N WD40_Prp19 Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_like RMC1_N CNH
Other DBs
NCBI-GeneID: 8863961
NCBI-ProteinID: XP_002683468
JGI: Naegr1_61327
UniProt: D2UY30
LinkDB
AA seq 777 aa
MKKVATPNSSKKRKHQQQHSSAKKVLESTPREDEVSEPTSANTTAKYGDKIITTTTNNNN
TIEHVEEKKVKREHQPTTHRNSSFIVDELNVTKNIHISAIKRLCFNPTQSLLAVARFNSE
IEIWSIDGQKSSVDTNRPIENCTLIKRLPGKIGTTIESIIWTGDNRLFTAGLHGMITEWD
LERQSPKRISTSVLGGAIWSMDHCAEKNLIAIACEDGAVRLINDEDLSLKFFLAPSRTNE
PPSGKKYKHCENSHRMLTTKIIDGGNKVLVGGMTGVYCFDLNKRTLVYKISLKNSFCWCM
EILNDSIMVVGDSEGNIHFCDYRLGAIVNSVKGHDGDVLRICIQKPGVIYSTGVDGSISM
YKEVGKKYVSVIKKRPSLHDLLDMVYCEKEKSLYFGGLNCAILRMKTEIFYRQQDLKDKI
FDRIRIKPNRDLLKVATGSRLALYDNLANQITLLKLPESNIENRQVSLNDPASILMQVKI
KSKGNWYSSMSDISPNGKHISVASVDCTYLITLATDENGGVSLENKINLSDKEYNVVPGH
YTAFAGNNHLLIASRDCSTLQLFNIEKKTVQSIHLPSSKIDSSLENENSPFRVFSNSING
LIANEKYVIVSKGNLVLCYRLESLISENNKVHFEIELPTHNGFIYKIGFLNPCDSVCPAF
YSLSNPNTITVFDANKRRTIISPLSFPTEKLNQAVISSLHQLSLKYYLVTSLTRCFLLDS
STLEIKDYVLANRLGKTEDMIGFSSVCGNELIMASFDYNTHTEELLPPVIDRKRFGT
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgaagaaagttgcaacaccaaactcctcaaagaagagaaagcatcaacaacagcattct
tcagcaaaaaaggttttagaatcaactcctcgtgaagatgaagtgagtgaaccaacatca
gcaaacacaacagcaaaatatggagacaaaattattacaaccactactaacaacaacaac
acaattgaacatgttgaagaaaagaaagtaaaaagagaacatcaaccaacaacacatcgt
aatagtagttttattgttgatgaattaaatgttactaaaaatattcacatttcagctatt
aagagactttgttttaatcctactcaatcacttttagctgttgctaggtttaatagtgaa
attgaaatttggtcaattgatggtcaaaaaagtagtgtagacactaatcgtccaattgaa
aattgtactcttattaagagattaccaggaaagattggaactacaatagagtcaataata
tggacaggagataatagacttttcacagcaggtctccatggaatgattacagagtgggat
ttggaaagacaaagcccgaagagaatttctacttcagttttgggaggtgctatttggagt
atggatcattgtgctgaaaagaatttaattgctattgcttgtgaagatggagcagtaaga
cttattaacgatgaagacttgagtttgaaattcttccttgcaccttcaagaaccaatgaa
ccacctagtggaaagaaatataagcattgtgaaaatagtcatagaatgctaaccacgaag
attattgatggaggtaataaggtacttgttggtgggatgaccggagtttattgttttgac
ctcaataagagaacacttgtctacaaaatttccttaaagaactcattctgttggtgtatg
gaaatactcaatgatagcattatggttgttggtgattctgagggaaatattcacttttgt
gactatcgtttaggagctattgttaactcagttaagggacatgatggtgatgtattgaga
atttgcatccaaaaacctggtgttatttattcaacaggtgttgatggaagtatttccatg
tacaaagaagttggcaagaagtatgtctctgtcattaaaaagagaccatccctccatgat
ttattggacatggtatattgcgagaaggaaaaatctctttactttggaggtcttaattgt
gccattttgagaatgaagactgaaattttctatagacaacaagatttaaaggataaaatc
tttgacagaataagaatcaaaccaaacagagatttgctaaaagttgctacgggttcaaga
ttggctctttatgataatttggctaatcaaattacacttttaaagttgccagaatctaat
atcgagaatagacaagttagtttgaatgacccagcctcaattttaatgcaagtcaaaatt
aaaagtaagggtaactggtatagttccatgtcagacatttcaccaaatggaaagcatata
tctgtcgcttcagttgattgcacttatttaataacacttgccacagatgaaaatggagga
gtttctttggaaaataagattaacctttctgataaggaatataatgttgtacctggtcac
tatacagcatttgcaggaaataatcaccttttaattgcatccagagattgttcaactctt
caattatttaatattgaaaagaagacagttcaatcaatccatttaccatcctcaaagatt
gattcatcactcgaaaatgaaaactcaccattcagagtattttcaaattccattaatggc
ttgattgctaatgaaaagtatgtgattgtatcaaaagggaatcttgtactgtgttataga
ttggagagtttaatctctgagaataataaggttcattttgaaatagaattaccaacacat
aacggatttatatacaagattggctttttaaatccatgcgatagtgtgtgtcctgccttt
tattctctctccaatccaaataccattactgtctttgatgctaacaagcgtagaactatt
atttctccattgtcattccctactgaaaaattgaaccaagcagtaatcagttctcttcat
caactttcactcaagtactatttggttacctctttgactcgttgcttccttctggattcc
agtactcttgaaattaaggattatgttttagcaaacagattaggaaagactgaagatatg
attggattttcatctgtttgtggtaatgagctgataatggcttcattcgattacaatact
cacacagaagaacttttaccacctgttattgacagaaaacgtttcggtacataa

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