KEGG   Naegleria gruberi: NAEGRDRAFT_61424
Entry
NAEGRDRAFT_61424  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K12878  THO complex subunit 1
Organism
ngr  Naegleria gruberi
Pathway
ngr03013  Nucleocytoplasmic transport
ngr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NAEGRDRAFT_61424
  09122 Translation
   03013 Nucleocytoplasmic transport
    NAEGRDRAFT_61424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngr03019]
    NAEGRDRAFT_61424
   03041 Spliceosome [BR:ngr03041]
    NAEGRDRAFT_61424
Messenger RNA biogenesis [BR:ngr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     NAEGRDRAFT_61424
Spliceosome [BR:ngr03041]
 Complex C
  Other components
   EJC/TREX
    NAEGRDRAFT_61424
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    NAEGRDRAFT_61424
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 8855383
NCBI-ProteinID: XP_002683512
JGI: Naegr1_61424
UniProt: D2UYC5
LinkDB
AA seq 619 aa
MEIILSKSSHHLVNLLLCDFFDHDPKQQTMLENLLVNVFKIPLDFMKSFKKNLKDIISST
TTTEGEINSREFVEQLSNENAESLESLVRSSLKIYLLYEQARLSKGLTTEINFSFLDEIT
KVTLHSLKSEQHDEEKKKAMSIIPILILSEYCNHFNHAKQIEQIFNYCMDGSKGNDFIEV
LRLCCSDYKIRALELLKTVRGVFASKKVSKIEDSVTCGRILLFVASVLPYNHDACINKGG
HFNKEHHSLLEQQILNDNNEDSSNTQDDFEIYWGLQVHIIQILELQSTLASFYNSYPRGN
DECPSWSLFSREVDRILKCLDTRFTTNIQTMKQLKKNNQSTNHESALVQDLFSPIKLLKN
RTLFDLQLDDVRFRRQVLIQLLVTIYRLLEKNSEPSFYLSELKTLKDKTLNVVRKYDPES
VTLLETILDRERHWSNWKSNGCTPYFKDHESVFPPSTKVDQSFKNTEMAKFLTCDISQAS
IDKFLRSSDNILRSYNFKDYIVPCVKEEIHHSYSEKMVNSSVVFVWKSCRLLSEFDLKYL
SLALEDLKKDHTKKSQHFLETISLEVSPPEPSSSEGSNNYENSEEPEENSKKRKSPSAED
DDDNTNEAKKVKTDTENNL
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggaaataatactttcaaaatcatcacatcacttggtcaatctcttgttgtgtgatttt
ttcgatcatgatccgaaacaacaaaccatgttggaaaatttattggtgaatgtttttaaa
attcctctcgattttatgaagagtttcaaaaagaatttgaaggatatcatttcatcaaca
actactacggagggagaaataaattcgcgtgaatttgtggagcaattatctaatgaaaat
gctgaaagtttggaatcactagttaggagtagtttgaaaatttatttattgtatgaacaa
gctaggttgtcgaaaggattaacgacagaaattaatttttccttcttggatgaaattact
aaagttacattacattcactaaaaagtgagcaacatgatgaagagaaaaagaaggccatg
tccatcataccaattttaattctgtcggaatattgtaatcatttcaatcatgccaaacaa
attgaacaaattttcaattattgtatggatggaagtaaggggaatgattttattgaagtt
ttgagattatgctgttccgattataaaattcgagctctagaattactcaaaacagtgaga
ggcgtatttgcatcgaaaaaggtatcaaaaattgaggattctgtcacttgtggtagaatt
ttattgtttgttgcttccgtacttccatataatcatgatgcctgtatcaataagggtggt
cactttaacaaggagcatcactcattgttggaacaacaaattttaaatgataacaatgag
gattcaagcaatacacaggatgattttgaaatttattggggacttcaagtgcatataatt
caaatattggaacttcaatctacacttgcatcattctataatagttatccaagaggaaat
gatgaatgtccaagttggagtttattttcgcgtgaagttgatagaatattgaaatgcttg
gacactagattcacaacaaacattcaaaccatgaaacaattgaagaagaataatcaatca
accaaccacgagtcagcactagttcaagatttattttctcctatcaaactcttaaagaat
agaacactattcgatttacaattagatgatgttagatttaggagacaagtactaattcaa
ttattggtaacaatctacaggttgttggagaaaaattcagagccatccttctatttgagt
gaactcaaaaccttgaaggacaaaactctgaatgtcgtaagaaaatacgatccagaatca
gtcaccttactagaaactattctcgacagagaacgacactggtccaactggaaatccaat
ggatgtacaccatacttcaaagatcatgaatccgttttccctccatcaactaaggttgat
caatccttcaagaatactgaaatggctaaatttttaacatgtgacatttctcaagcatct
attgataagtttttaaggagctcggataatattctcagatcgtataatttcaaagattat
attgttccttgtgtaaaggaagaaattcatcactcgtattctgaaaaaatggttaacagt
agcgtagtatttgtgtggaaatcgtgtagattactttcagaatttgatttgaaatatctt
tccctagctctggaagacttgaagaaagaccacacaaagaaatcacaacactttttggaa
acaataagtttggaagtttctcctccagaaccctcctcatctgaaggtagtaacaattat
gaaaattctgaagaaccagaagagaattcgaaaaagagaaaatcaccatcagcagaggac
gatgatgacaatacaaatgaagcaaagaaggttaaaacagatactgaaaataatttataa

DBGET integrated database retrieval system