Naegleria gruberi: NAEGRDRAFT_61424
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Entry
NAEGRDRAFT_61424 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_61424
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_61424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_61424
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_61424
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
NAEGRDRAFT_61424
Spliceosome [BR:
ngr03041
]
Complex C
Other components
EJC/TREX
NAEGRDRAFT_61424
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NAEGRDRAFT_61424
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
8855383
NCBI-ProteinID:
XP_002683512
JGI:
Naegr1_61424
UniProt:
D2UYC5
LinkDB
All DBs
AA seq
619 aa
AA seq
DB search
MEIILSKSSHHLVNLLLCDFFDHDPKQQTMLENLLVNVFKIPLDFMKSFKKNLKDIISST
TTTEGEINSREFVEQLSNENAESLESLVRSSLKIYLLYEQARLSKGLTTEINFSFLDEIT
KVTLHSLKSEQHDEEKKKAMSIIPILILSEYCNHFNHAKQIEQIFNYCMDGSKGNDFIEV
LRLCCSDYKIRALELLKTVRGVFASKKVSKIEDSVTCGRILLFVASVLPYNHDACINKGG
HFNKEHHSLLEQQILNDNNEDSSNTQDDFEIYWGLQVHIIQILELQSTLASFYNSYPRGN
DECPSWSLFSREVDRILKCLDTRFTTNIQTMKQLKKNNQSTNHESALVQDLFSPIKLLKN
RTLFDLQLDDVRFRRQVLIQLLVTIYRLLEKNSEPSFYLSELKTLKDKTLNVVRKYDPES
VTLLETILDRERHWSNWKSNGCTPYFKDHESVFPPSTKVDQSFKNTEMAKFLTCDISQAS
IDKFLRSSDNILRSYNFKDYIVPCVKEEIHHSYSEKMVNSSVVFVWKSCRLLSEFDLKYL
SLALEDLKKDHTKKSQHFLETISLEVSPPEPSSSEGSNNYENSEEPEENSKKRKSPSAED
DDDNTNEAKKVKTDTENNL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaaataatactttcaaaatcatcacatcacttggtcaatctcttgttgtgtgatttt
ttcgatcatgatccgaaacaacaaaccatgttggaaaatttattggtgaatgtttttaaa
attcctctcgattttatgaagagtttcaaaaagaatttgaaggatatcatttcatcaaca
actactacggagggagaaataaattcgcgtgaatttgtggagcaattatctaatgaaaat
gctgaaagtttggaatcactagttaggagtagtttgaaaatttatttattgtatgaacaa
gctaggttgtcgaaaggattaacgacagaaattaatttttccttcttggatgaaattact
aaagttacattacattcactaaaaagtgagcaacatgatgaagagaaaaagaaggccatg
tccatcataccaattttaattctgtcggaatattgtaatcatttcaatcatgccaaacaa
attgaacaaattttcaattattgtatggatggaagtaaggggaatgattttattgaagtt
ttgagattatgctgttccgattataaaattcgagctctagaattactcaaaacagtgaga
ggcgtatttgcatcgaaaaaggtatcaaaaattgaggattctgtcacttgtggtagaatt
ttattgtttgttgcttccgtacttccatataatcatgatgcctgtatcaataagggtggt
cactttaacaaggagcatcactcattgttggaacaacaaattttaaatgataacaatgag
gattcaagcaatacacaggatgattttgaaatttattggggacttcaagtgcatataatt
caaatattggaacttcaatctacacttgcatcattctataatagttatccaagaggaaat
gatgaatgtccaagttggagtttattttcgcgtgaagttgatagaatattgaaatgcttg
gacactagattcacaacaaacattcaaaccatgaaacaattgaagaagaataatcaatca
accaaccacgagtcagcactagttcaagatttattttctcctatcaaactcttaaagaat
agaacactattcgatttacaattagatgatgttagatttaggagacaagtactaattcaa
ttattggtaacaatctacaggttgttggagaaaaattcagagccatccttctatttgagt
gaactcaaaaccttgaaggacaaaactctgaatgtcgtaagaaaatacgatccagaatca
gtcaccttactagaaactattctcgacagagaacgacactggtccaactggaaatccaat
ggatgtacaccatacttcaaagatcatgaatccgttttccctccatcaactaaggttgat
caatccttcaagaatactgaaatggctaaatttttaacatgtgacatttctcaagcatct
attgataagtttttaaggagctcggataatattctcagatcgtataatttcaaagattat
attgttccttgtgtaaaggaagaaattcatcactcgtattctgaaaaaatggttaacagt
agcgtagtatttgtgtggaaatcgtgtagattactttcagaatttgatttgaaatatctt
tccctagctctggaagacttgaagaaagaccacacaaagaaatcacaacactttttggaa
acaataagtttggaagtttctcctccagaaccctcctcatctgaaggtagtaacaattat
gaaaattctgaagaaccagaagagaattcgaaaaagagaaaatcaccatcagcagaggac
gatgatgacaatacaaatgaagcaaagaaggttaaaacagatactgaaaataatttataa
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