Naegleria gruberi: NAEGRDRAFT_61637
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Entry
NAEGRDRAFT_61637 CDS
T01241
Name
(RefSeq) chromodomain helicase DNA binding protein
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_61637
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
NAEGRDRAFT_61637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
HTH_Hrp3
HTH_CHD6-9
SWI2_SNF2
ZapA
CHDCT2
Chromo_MIT1
SPIN90_LRD
Motif
Other DBs
NCBI-GeneID:
8863679
NCBI-ProteinID:
XP_002683307
JGI:
Naegr1_61637
UniProt:
D2UX51
LinkDB
All DBs
AA seq
1800 aa
AA seq
DB search
MDDSNEVVVNNDDDEEAEVEAPKRQRKIRRNVDRGSRTKQSSTIGAGDYEIPKRDLRTRS
KKIDYSEETQTVEEQEDEVVPEEPQEEEEPSEEEEEVKPKRTVRRRATTTTKPKARTTRG
GRRGAKSKKVDSDDDDVVVMDDDSDEEESSSSEEEGETTEELGADEGPTVFMDQDKDDVI
ELILACRVKKEEEEIQDDEEEGSEEKKTNSGEETIEYLCKYKNKSYLHCEWIPRYELDDD
IQTRNKINRFNKQYDVKYFEGLEEYFNPEFTEVERIIDRGVWDDSEVYCVKWKGLTYSES
TWEFENKIEDKEKIEQYKRINKLPTPEDRRIPARPAPHKFKKLEESPSFRDGNQLREYQL
EGLNWLVFCWYQRRNSILADEMGLGKTVQTVATLEYLRAFEHIRGPFIVIAPLSTVEHWK
REFENWTDMNVLVFHGNTQSREVMKNHEFFFKHPKTGNLIYHQKTYKFNVLITTYEIVMA
ESSYLSKIPWQYLVVDEGHRLKNHNSKLAQILKNFNAVHKLLLTGTPIQNNLTELFSLLQ
FLDPETFYDLDVFSEEYGNLGESGSEKLEGLHKLISPYILRRLKEDVEKSIPPKEEIVVE
VVPTSIQKAYEQAIFKRNREFLMKGVSKSQNVPKLNNVLMELRKVCNHPFLISGAEENIT
RGMSDVEVNEALIKSSSKMILVDKLLRKLREGGHKVLIFSQMVLVLNILEDYMRYRNFTY
VRLDGTIKGSIRQQAIDRFNDPNIDTFVFLVSTKAGGVGINLTSADTVIIYDSDWNPQND
LQAQARCHRIGQTKEVKIYRLLTKNTKEKEIFERASMKLGLDRAVLSSNNEFVQSTSKSS
TQNKPALEKEEIELLLRHGAYSAFKIDDTEEQKLLMDEDIDTIMERTATIVRYDQAKPSE
SNGFSNFSKATFCFSEDMEWENLLPREKTASGLMKLLSEDSSLDTEEQKKEYLNDVKALV
DIKIHEIEKFKYKPDDELATLLTQMMYARLLDEDHKQQAKAWLSILEQPRLRNGSTRNEE
SDQSDDDSKETVSKKKAGGWYKAERQRFQKSLLEVGWGKWGTIRENKLHAHTIEDIHSLA
ESFVSQLITMCDGENDVDFLKILLQSSTVPEDNDDLPSSSLKIELKNTPARAGDILKVHL
PKDADLSTSSIEIIKIAQQEARVSKKKKAKSQASSSKSSGKNLCVRFYELKEKDKEGDVC
ELYAPGVGGEYFVRLNYNGLSKASKSFEVQGVHPVLEDKEWIEQAKRAVKTWVKKLKFNL
RLTKILEAFTKLTTDNIPKVGIKAPTDWWDRECDRDLLVGFDLYGYGRFDEMKEDTSLCF
KEKHEEHMKKAKSRKEKKDAGSWPTIAVVNKRANKLMELLVKEKDISILAELKSNENDND
DLAFEETEISEPKTIVDSWSKREKADIQRTLINFGLCPAESSGEPNYAKIISLANLRKTE
SAVKTYVTHLVKAAKILNNEEEEKDTKESKKKDSNKPTTDDLAPGTAKKLIQRIDIMNSL
YTLVYPNWDEYKSKMKYLKPTGSGLPKWWKSEAHDKELIRGIKKHGFDFKKLFEDKEFKF
GSKDSPREGLLLSRIEEIISLLRKIDVQGSPSKAKSAWNFTPKKKHVLLKSPPLKEKSAP
KRKVKRQTTLDFKNTEDTSDPIEDSSDRDEDKMQDDDVKLSKSESSEPSSSQSDVPTIVE
DVLKKKIPKKIPKKEESQPEASSSSSSGNGTPLKRKKEDHHEDEDHHTPRRGEYEPNDKK
RKMGSSPADHKYSPSHHRENRDYRDRDDRRDSRDRESYRDDRRDSREYRRDRDGRDYHRR
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atggacgattctaacgaagtagttgtcaataacgacgatgacgaagaagcagaagtagaa
gcaccaaaaagacaacgtaaaatcagaagaaatgttgatcggggctcaagaacaaaacaa
tcaagcacaattggtgcaggagactatgaaatcccaaagagagacctcagaacaagatcc
aagaagattgactactctgaggaaacacaaaccgttgaagaacaagaagatgaagttgtt
ccagaagaacctcaagaagaggaggaaccttctgaagaggaagaagaagttaaaccaaaa
cgtacagtcagaagaagagcaacaacaacaacaaaacctaaagcaagaactacacgtggt
ggacgtcgtggtgcaaaatccaaaaaggttgattcggatgatgatgatgttgttgttatg
gatgatgattctgatgaagaagagagctcttcatccgaagaggaaggtgaaacaacagaa
gaactcggtgctgatgaaggacctaccgtttttatggatcaagataaagacgatgtaata
gaattaattttagcttgtcgagtaaagaaagaagaagaagaaatacaagatgacgaagaa
gaaggttccgaagaaaagaaaactaatagtggcgaggaaacaatagaatatttgtgtaaa
tataagaacaaatcttacttgcactgcgagtggatacctaggtacgagctggatgatgat
attcaaaccagaaacaaaatcaatagattcaacaagcaatatgatgtcaagtattttgaa
ggattggaagaatatttcaatcctgaatttacagaagtagagcgtatcattgatcgtggt
gtttgggatgactctgaagtttattgtgtaaaatggaaaggtcttacatatagtgaatca
acttgggaatttgaaaataagattgaagacaaggaaaagattgagcaatacaagaggatt
aataaattgccaacaccagaagatagaagaatacctgcaagaccagctcctcacaaattc
aaaaagttagaagaatcaccatcatttagagatggtaatcaattgagagaataccaatta
gaaggtttgaattggttggtattttgttggtatcagagaagaaattcaattcttgccgac
gaaatgggtctcggtaaaactgttcaaacagttgcaacacttgaatatttgagagctttt
gaacatattagaggtccattcatagttattgcacctctttccactgttgaacactggaag
agagagtttgaaaattggacagatatgaatgttcttgtattccatggtaatactcaatca
agagaggtaatgaagaatcatgaattcttcttcaaacatccaaagactggtaacttaatt
tatcatcaaaagacatacaagtttaatgtactcattacaacttatgaaattgtcatggct
gaatcatcttacctttcaaagataccttggcaatatttggttgttgatgaaggtcataga
ttgaaaaatcacaactcaaaattggcacaaattcttaagaattttaacgctgtacacaaa
cttttgctgactggtactcctattcaaaacaatctaacagaattgttctcattgctacaa
ttcttagatcctgagactttttatgatcttgatgttttctcagaggaatatggaaatttg
ggtgagtctggttctgagaaattggaaggactacataagttaatttctccatacattctt
agaagattgaaggaagatgtagaaaagagtattcctccaaaggaagaaattgtcgttgaa
gttgtcccaacctcaattcaaaaagcatacgaacaggctattttcaagagaaatagagaa
tttttaatgaagggtgtctccaaatcacaaaatgttccaaagttaaacaatgttcttatg
gaattgagaaaagtttgtaaccatccattcttgattagtggtgctgaagaaaacattacc
agaggtatgagtgacgtggaagttaatgaggctcttattaaatcaagtagtaagatgatt
cttgtagacaagctcttgagaaaattgagagaaggtggccataaggttcttattttcagt
caaatggttctcgtattgaacattcttgaagattacatgaggtatagaaactttacctat
gtaagactcgatggtaccattaagggatcaatcagacaacaagctattgatagatttaat
gatcctaacattgatacatttgtatttttagtttccaccaaagcaggaggcgtaggtatt
aacttgacttctgctgacactgtcattatttatgacagtgattggaatcctcaaaatgac
ttgcaagcccaagctagatgtcacagaattggtcaaaccaaggaagtcaagatttatcgt
cttcttaccaagaatacaaaggaaaaggaaatctttgaaagggcttcaatgaagttaggt
ttagatagagctgttttgtcatcaaataatgaatttgtccaatccacttccaagtctagt
acgcaaaacaaaccagcacttgaaaaagaagaaattgaacttttactaagacatggtgct
tattctgctttcaagattgatgatacagaagaacaaaaattgttgatggacgaagatatt
gataccatcatggaaagaacagcaactattgtcagatatgatcaagctaaaccatcagaa
tctaatggattttctaacttttctaaagctacattctgcttctctgaagacatggaatgg
gaaaatttacttccacgtgaaaagacagcttcaggtttgatgaaattattgagtgaagat
tcttctttggatactgaagaacaaaaaaaggaatatctcaatgacgtaaaggcacttgta
gatatcaagattcatgaaattgaaaagttcaaatataagccagatgatgaattggcaact
cttcttactcaaatgatgtatgccagattgttagatgaagatcacaaacaacaagcaaag
gcatggttatcaattcttgaacaaccaaggttgagaaatggttcaactcgtaatgaagag
tctgatcaatcagatgacgactctaaagagactgtctcaaagaaaaaggctggaggttgg
tataaggctgaaagacaaagattccaaaagtctttattggaagttggttggggtaaatgg
ggaactattagagagaacaaacttcatgctcatactattgaagatattcattctcttgct
gaaagttttgtcagtcaacttattactatgtgtgatggcgaaaatgatgtcgacttcctc
aagattttgttgcaatcctcaacagtgcctgaagataatgacgatttaccaagttcttcc
ttaaagattgagctcaaaaacacaccagcaagagctggtgatatcttgaaggttcattta
cctaaagatgctgatctttccacttcaagtattgaaattattaagattgctcaacaagaa
gcaagagtctccaagaagaagaaagccaaatctcaagcaagcagttccaagagttccggt
aagaacctttgcgttagattctacgaattgaaggaaaaggataaggaaggtgatgtttgt
gaattatatgctcctggtgttggtggtgaatattttgtaaggttgaattataacggactt
tccaaggcaagtaaatcattcgaagtccaaggtgttcatccagtattagaagataaggag
tggattgaacaagccaaaagagctgtaaagacttgggtcaaaaagctcaagtttaatttg
cgtctcacaaagattcttgaagcttttacaaagttgaccactgataatattccaaaggtg
ggcattaaggctcctacagactggtgggatagggaatgcgatagggacttattagttggt
tttgatttatatggctatggtcgctttgatgaaatgaaagaagacacctctctttgcttt
aaggaaaaacatgaagagcacatgaaaaaggcaaagagtagaaaggaaaagaaggatgct
ggctcttggccaactattgctgtggttaacaaacgtgctaacaaactcatggaattatta
gttaaggaaaaggatatttctattcttgcagaacttaaatctaatgaaaatgataatgat
gatttggcttttgaagaaactgaaatttctgaaccaaaaacaattgttgactcttggagt
aagagagaaaaggcagatatccaaaggacacttatcaactttggtttatgtccagctgaa
tcatctggtgagcctaactatgccaaaattatttcattggccaatttgagaaaaactgaa
agtgctgtaaagacctacgttactcacttggtaaaagcagcaaaaatacttaacaatgaa
gaagaagagaaggatactaaagaatccaagaagaaagattcaaacaagccaacaactgat
gatttggctccaggtactgcaaagaaattaattcaaagaattgatataatgaatagtctt
tatacacttgtttatccaaactgggatgaatataagagcaagatgaaatacttgaaacca
acaggttcaggtttacctaaatggtggaagtcagaagcacacgacaaggaacttatcaga
ggtatcaagaaacacgggtttgattttaagaagttgtttgaagataaggagttcaagttt
ggatcaaaggattcaccaagagagggtctactcctttcacgtattgaagaaattatttct
ttattaagaaagattgatgttcaaggatcaccttcaaaagctaaatcggcttggaacttt
actccaaagaagaaacatgtacttcttaaatcaccaccactcaaggaaaagtctgctcca
aaaagaaaagtcaagcgtcaaacaactcttgatttcaagaatactgaagatacaagcgat
ccaattgaagattcaagtgacagagatgaggacaagatgcaagatgatgatgttaagcta
tctaaatctgaatcctcagaaccatcttcatcacaatctgacgtgccaaccattgttgag
gatgttttgaagaagaagattccaaagaagatcccaaagaaggaagaatcacaaccagaa
gcctccagcagttctagcagtggaaatggtacaccacttaaaagaaagaaagaagatcat
cacgaagatgaggatcatcataccccaagaagaggtgagtatgagccaaatgataagaag
agaaagatgggttcctctccagcagatcacaaatattctccatctcaccatagagaaaac
agagactacagagaccgtgatgatagaagagacagtagagatagagagagctatcgtgat
gatagaagagacagtagagagtacagaagagacagggatggcagagactatcacagaagg
taa
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