Naegleria gruberi: NAEGRDRAFT_61798
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Entry
NAEGRDRAFT_61798 CDS
T01241
Symbol
AM36
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ngr
Naegleria gruberi
Pathway
ngr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NAEGRDRAFT_61798 (AM36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_61798 (AM36)
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
NAEGRDRAFT_61798 (AM36)
Prokaryotic type
Archaeal type
TFE
NAEGRDRAFT_61798 (AM36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
8852713
NCBI-ProteinID:
XP_002682621
JGI:
Naegr1_61798
LinkDB
All DBs
AA seq
459 aa
AA seq
DB search
MSLYHHHKTQTVYVLLRTVMRAFYDPVHAVVMDALLHYQTSQLDEVKESELAKKVNLQPS
VVKKALLELYSDLLLTKEERATERKKGQKKYPSRSETYWRVDYEQCINAIRYKMYLLSLE
VKKKVQADPTYTCTVCDEEYEAYDVTRLLDFATGTLICQTCGGQVDESRESLEKHEETIS
GSDSLEVRYNNQLQLIIEKLNECKAYVVPKEYRWNYKHIVTKEEADRKIEEQRKAIEREK
SMGSHRPVSTISRNTQSNNLGATAHVAKASALSSSSYISLDPSANIKIDFVEERGIIDDD
SDAHIQNNPVQKKPDNPFFLKQTVSSREYNDYNQANDVEDDDDHIISSKDREIDTSVYHE
LLEREAAENAKSEKMVDEFEAIDEGVMDNMITDTNEFESVTNFEQDNGMDGNNNEPMIFV
AGVPVPYSQITPEHESAMTELEYEEYDRIKAEQEQIYDF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatatcatcatcacaaaacacaaacagtctacgtcttgttacgtacagtgatg
agagcattttatgatccggtccatgctgtggtgatggatgctctattgcactatcaaaca
agtcagttagatgaagtgaaggaatccgaattggctaaaaaagttaatttgcaaccaagt
gttgttaagaaggccctgttagaattgtattctgatttattattgacaaaggaagagagg
gctacggaacggaaaaagggacagaaaaagtacccatcacgatccgagacttattggaga
gtggattatgaacaatgtatcaatgctattcgatacaagatgtatttattatctttggaa
gtgaaaaagaaagttcaagcagatccaacctatacttgtacagtttgtgacgaggaatat
gaagcttatgatgttactagattattagattttgcaacaggaactcttatatgtcaaact
tgtggaggtcaagttgacgaatcacgtgaatcattggaaaaacatgaagaaacaatatct
ggaagtgattcattggaagtaagatataataatcaattacaacttattattgaaaaattg
aatgaatgtaaagcctatgttgtaccaaaggaatacagatggaattacaaacatattgtc
acaaaggaagaggctgatagaaagattgaagaacaacgtaaggccatcgagagagagaaa
tctatgggatcacatcgtccagtttccacaatatcaagaaatactcagtccaataacttg
ggtgctactgcacacgttgccaaggcctctgccttatcttcaagtagttacattagtttg
gatccatcggcaaatatcaagattgactttgtggaagaacgtggaattattgatgatgac
agtgatgctcatattcaaaacaatccagttcaaaagaaacctgataatccattcttcttg
aaacaaacagtttcttcacgtgaatacaatgattacaatcaagcaaatgatgttgaggat
gacgatgaccacattatttcatcaaaggatagagaaatcgacacctctgtttatcatgaa
ttattggaaagagaagctgctgaaaatgccaaatcagaaaaaatggttgacgaatttgaa
gcaattgatgaaggtgtgatggataacatgatcactgatacaaatgaatttgaaagtgtt
accaatttcgaacaagataatggaatggatggtaataataatgagccaatgatttttgtt
gctggtgtacctgtaccatattctcagatcactcctgagcatgaaagtgccatgactgaa
ctagaatatgaagaatatgatagaattaaggccgaacaagaacaaatatatgacttttaa
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