KEGG   Naegleria gruberi: NAEGRDRAFT_61926
Entry
NAEGRDRAFT_61926  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
ngr  Naegleria gruberi
Pathway
ngr03020  RNA polymerase
ngr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NAEGRDRAFT_61926
  09124 Replication and repair
   03420 Nucleotide excision repair
    NAEGRDRAFT_61926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngr03021]
    NAEGRDRAFT_61926
   03400 DNA repair and recombination proteins [BR:ngr03400]
    NAEGRDRAFT_61926
Transcription machinery [BR:ngr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NAEGRDRAFT_61926
  RNA polymerase III system
   RNA polymerase III
     NAEGRDRAFT_61926
  RNA polymerase I system
   RNA polymerase I
     NAEGRDRAFT_61926
DNA repair and recombination proteins [BR:ngr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NAEGRDRAFT_61926
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 DmmA-like_C FtrD-like DUF5816 Zn_ribbon_13 Msap1 DUF7130 ArgZ-like_C_1st Lar_restr_allev
Other DBs
NCBI-GeneID: 8863424
NCBI-ProteinID: XP_002682688
JGI: Naegr1_61926
UniProt: D2UZG3
LinkDB
AA seq 121 aa
MDGNNYYSPTAQSPGATYASPHYVSPSSYTPGGVPMSPNATSNPFQPSSHQQQLQESLPS
LNQPSSTTAKREKTVAVVYICGHCAVLNTIKQGDAIRCKNCGYRIMYKQRTTRSKCYLCF
V
NT seq 366 nt   +upstreamnt  +downstreamnt
atggacggaaacaattattactctccaacagcacaatcaccaggtgctacctatgcttcg
ccacactatgtatcaccatcatcatatacaccaggtggtgtaccaatgtctcctaatgcc
acatctaatcctttccaaccttcatctcaccaacaacaattgcaagaaagcttgccatct
ttgaatcaaccatctagtactactgctaagcgtgaaaaaactgtagctgttgtttatatt
tgcggacattgtgctgttttgaacactattaaacaaggtgatgctatccgttgtaagaat
tgtggttatcgtatcatgtacaaacaaagaacgacgagaagtaagtgttatttgtgtttt
gtatga

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