Naegleria gruberi: NAEGRDRAFT_62031
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Entry
NAEGRDRAFT_62031 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_62031
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
NAEGRDRAFT_62031
microRNA pathway
RISC loading complex
NAEGRDRAFT_62031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helicase_C
Dicer_dimer
PAZ
ResIII
DEAD
dsrm
DUF3837
Afi1
Motif
Other DBs
NCBI-GeneID:
8858891
NCBI-ProteinID:
XP_002682950
JGI:
Naegr1_62031
UniProt:
D2UZR2
LinkDB
All DBs
AA seq
1386 aa
AA seq
DB search
MVAIMLIDYMLNETEQNDKKLVFIAENRILVNQQAEHIRSTLKYLETERLEQQDSKSIDN
ISKNIDGMVACYVGDSGLLNKLRSNKELKKKKVIVTTAAFLQNLLTHNIIEMESISLLII
DECHHCGDGDHPYKVIMTQYYHTIKQVEKRPKIFGMTASAIRSLNETKANLQKQKLEAYL
DCKLTTISSEDELYSELREHTNLPNEIILTYESTNSESTKIDDLKDFCTLIVENLTKFST
IQTKDIIEISRILFNDFNYILDNLGSSCLKDYLTIIFDHIEERKQENQSLSTSELVSFSS
DSSYQQLKKNQEFEIIVSESVRNKLTNKIEKIFPKPSPSRKLKLLEEVLNEHFPENNTTN
QMRCIVFCERRHTAILLSRYFAKKGLPCDFIIGHNALSVRTKLGFKKNTGFEQKSKTERF
RSGELKCLFCTNVVEEGFDVPACNLVIRFDKFTDFLRAYIQSRGRARKQESKFIMMVNST
DLTQQELCKNGKRLQEKMLTQISDDTPNNSEIEDILIYETPSKAKLTLNNSIRLYNQYCA
VFPNQSIDEKKPKFSIYADGPFFVTEITFPTNCPVPVFSISNNHEDDPAQYRLNKLVSKR
YCAFKAVQLLHKYKELDDSLFPRYSKYVFASTEAEFASPASMATLLPQMPEIFNWREKKL
NSIQTDNPSHCVYIYDIFLDNNATDFQFIIPNEIDSDLEELGLLNFRMNGGRHITIKKME
STTVDNDYILKCFEYHEFMFNKVAKISFPDQKQRNLQDWTFFIIPKQAQQHFIDVPVLDI
IQHHGKEAENILKNMILETIYNHRVYLLQNIEFDKNPKSHFDTEDFPDYKTYYKEKWGLE
IERPQQPLLRAYQPRFSTLGSTQVEHQNIFLVPEFLTACSFTIEMLRFLKLAPEFLYRYY
NRLITSIFSKQFELFQPIVDATLLEDGKTLEAFELLEEALTAKRSQVGANYEKLEFFGDS
ILKYIVSKHIYHEFPLYSSGSLSQLQHKFVSNYFLASVARNTRLPLFIITEPLNTSQLVQ
NIGGFKSNKFADETNIEAEYKVLADVVESIIGFCYHIFGGSLEQINRFLGLVGVSLPKGE
ISGSEDIFMNQKLLLRNHFEKLKIDLYKLTEKLNFQFENSGLLLEAFIHPSYNGVFNYER
LEFLGDSVLGLIVTSKIFEKFHKNSSFSLGMMSKLREKIVMNKNFANLCIENQLQNYIIF
SGNHIAQQVVHSKDDGEYVKMLSDVFESLAGALFVDSHYDLDTVKLIYDEFLWKNFMDEI
FTEAENEVSMNSNVTEIVGNPNNPIVTFISTNITRDSSSVLNELLQQFVFNRLDKSEKWY
MEESKKPNPPFNMVADFSITIFEKTFTGRGPSIKLAKKQASAECLQYLLEKSEAFLEDLE
KEISKK
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaatcatgttgatagattatatgctcaacgaaactgaacaaaatgataaaaag
ttagtctttattgctgaaaaccgtatacttgtaaatcagcaagcagaacacataagaagc
accctaaagtatctggagacagagagattagaacaacaggattccaagtcaatcgataat
atttcgaaaaatattgatggaatggtggcctgttatgtgggtgattcaggattattgaac
aagctacgttcaaacaaggaattgaaaaaaaagaaagttattgttactactgctgcattc
ttacaaaatttattaactcataatataattgaaatggaatccatttctctattgattatt
gatgaatgtcaccattgtggagatggtgatcatccttataaagtaatcatgactcaatac
tatcacaccattaagcaagtagaaaaaagaccaaaaatatttggaatgacagcttctgct
attagatctttgaatgaaacaaaggctaatcttcagaaacaaaaacttgaggcataccta
gattgtaaattgactactatatcttctgaggatgaactctatagcgaactaagagaacac
actaatttaccaaatgaaattattctcacatatgaatcaactaattcagaaagtactaaa
attgatgatttgaaagatttttgtactttgattgtagaaaacctaaccaaattttcaacc
atacaaacaaaggatattattgaaatatcgaggatactttttaacgattttaattacatt
ctagacaatctaggttcctcatgcttgaaagactatctaactataatatttgatcatata
gaagaaaggaaacaagagaatcaaagtttatctacaagtgaattagtttcttttagtagc
gattcatcctatcaacaattaaaaaagaatcaagaatttgagataattgttagtgagagt
gtacgaaacaagcttactaacaaaatagaaaaaatatttccaaaaccatcaccaagtaga
aaattgaaattattggaggaggttctgaatgaacattttccagaaaacaatacaactaac
caaatgagatgtattgttttctgtgaaagaagacatacagcaattttattatccagatat
tttgccaagaaaggattgccttgcgattttataataggacataatgctctctctgtaagg
acaaaacttggatttaagaaaaacacaggatttgaacaaaagagtaaaacagaaagattc
agatcaggagaactcaagtgccttttctgcaccaatgtagtagaggaagggtttgatgtg
cctgcatgcaatctggtaattcgttttgacaagtttacagattttttgagagcctacatt
caaagtagaggtagagcaagaaaacaggagagtaaatttataatgatggtcaattcaacg
gatttaactcaacaagagttatgcaaaaatggtaaaagacttcaagaaaaaatgttgacc
caaatatccgacgatactcccaataattcagaaattgaagatatcctaatatatgaaaca
ccctccaaggcaaagcttactcttaacaatagtataaggctgtataaccaatactgtgct
gtttttcctaatcaatcaatagatgaaaaaaaaccaaagttttcaatctacgccgatggt
cctttttttgttacagaaataacctttccaactaactgccctgtccctgtttttagtatt
tctaataatcatgaggatgatcctgcccagtacagactcaacaaactcgtatctaaaaga
tattgcgccttcaaagctgtccaattacttcacaagtacaaggagttggatgatagtctc
tttccaagatactcaaaatacgtgtttgcttctacagaagctgaatttgcatcaccagca
tcaatggccactcttttgcctcagatgcctgaaatattcaattggcgagaaaagaaactc
aactcaatccaaactgataatccctcccattgtgtttatatttatgatatatttctggac
aacaatgctacagattttcaatttataattcctaatgaaattgattctgatcttgaagaa
ttgggacttcttaactttcgaatgaatggtggtagacatattacaattaagaaaatggaa
tccacaaccgttgataatgattatattttgaaatgttttgaataccatgaatttatgttt
aacaaggttgcgaaaatttcctttccagaccaaaaacaaagaaaccttcaagattggaca
ttttttattattcccaaacaagctcaacaacattttatagatgttccagtcttggatatt
attcaacaccatggtaaagaggcagaaaatatactgaaaaatatgattttggaaactatt
tacaaccatagagtatatctacttcaaaacattgaattcgacaagaatccaaaaagccat
ttcgatacagaggatttcccagattacaaaacttattataaggaaaaatggggtttggaa
attgagaggcctcaacaaccattattaagagcctatcaaccaagattttctactttgggt
tcaacacaagttgaacatcaaaatatttttctggttccagaattcttaactgcttgctcc
ttcactattgaaatgcttagatttttaaagctagctccagaatttttgtatagatattac
aatagattgataacatcaatattttccaaacagtttgagcttttccaaccaatagttgat
gctacattacttgaagatggtaaaacccttgaagcattcgagttgttggaggaggcactt
acagcaaagcgatctcaagtaggagcaaactatgaaaaactcgaattttttggagacagc
atactgaaatatattgtcagcaaacacatctaccatgaatttccgttatatagctctggt
tctctttcacaactgcaacacaagtttgtcagcaactatttcctagcctctgttgcacga
aatacacgccttcctctatttatcattacagagccattaaataccagtcaactggttcaa
aatattggtggtttcaaatcaaacaaatttgctgatgaaacaaatattgaagccgaatat
aaggtactggctgatgttgttgagagcattattgggttttgctatcatatattcggtgga
tctctagagcaaattaatagatttttgggtttggttggagtatcattaccaaaaggagaa
ataagtggctcagaggatatttttatgaatcaaaaattactgttaagaaaccattttgaa
aaattgaaaattgatttatataagcttacagagaaactcaattttcaatttgaaaattca
ggattactacttgaagcatttattcacccatcatacaatggagtattcaattatgaaaga
cttgaatttttaggtgattctgttttaggtttgatagtaactagcaaaatattcgaaaaa
tttcacaaaaattctagcttctccctaggaatgatgagcaagcttcgagagaagattgta
atgaataagaattttgccaatctatgcatagaaaatcaacttcaaaattatattattttt
agtggaaatcatattgcccaacaagttgttcactcgaaagatgatggtgaatatgtaaaa
atgctaagtgatgtgtttgaaagtttggcaggggccttatttgttgacagtcattacgat
ttggatactgttaaattaatttatgatgaatttttatggaaaaattttatggatgaaata
ttcacagaagctgaaaatgaagtatccatgaatagtaatgttacggaaattgttggaaac
ccaaacaatccaatcgttacattcatatccacaaatattactagagattcctcatctgta
ttgaacgaattgttacagcaattcgtctttaatagacttgataaatctgaaaaatggtat
atggaagaatctaaaaaacccaacccacctttcaacatggtagctgatttttcaataaca
atattcgaaaagactttcactggtagaggtccaagtataaaattggcaaagaaacaagcc
agtgcagaatgtctacaatatttattggaaaagagtgaggcgtttttggaagatttggaa
aaagaaatatccaaaaagtaa
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