Naegleria gruberi: NAEGRDRAFT_62711
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Entry
NAEGRDRAFT_62711 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ngr
Naegleria gruberi
Pathway
ngr03410
Base excision repair
ngr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NAEGRDRAFT_62711
03450 Non-homologous end-joining
NAEGRDRAFT_62711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_62711
Enzymes [BR:
ngr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NAEGRDRAFT_62711
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
NAEGRDRAFT_62711
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
NAEGRDRAFT_62711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
NTP_transf_2
Cdd1
IMS_HHH
HHH_5
MG3
Motif
Other DBs
NCBI-GeneID:
8862548
NCBI-ProteinID:
XP_002682120
JGI:
Naegr1_62711
UniProt:
D2V1V6
LinkDB
All DBs
AA seq
309 aa
AA seq
DB search
MKRVEGISSSYQNQIIQEFTKIWGVGQKTAFQLYSYGYRNINEIDKSKLNSQQLIGLKYF
YEFQQRIPRMEVEQIYNLINQVCYEINPFIVCQVCGSYRRGKQDSGDVDILITLKQDEND
NQFSSIELSSNESSSIESNELITINNINNNNNNNNNHINNNHNNNNEKIIIDGLLQKIVT
KLEEMKIITDTLSISCKIHLNQDENDTFMGVYYLPQIGIHRRIDIKVYRREHFAFALLYF
TGSDHFNRSLRLLCRKKGYSLSDKSLCINTIRDSKSNRIHDGTKINCKTENDIFNFIGIP
FKEPKDRDV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagttgaaggaatttcatcttcatatcaaaatcaaataattcaagaatttaca
aaaatttggggagttggacaaaaaacagctttccaattatattcatatggatatagaaat
ataaatgaaattgataaatctaaattaaattcacaacaattaattggattaaaatatttt
tatgaatttcaacaaagaattccaagaatggaagttgaacaaatttataatttaattaat
caagtttgttatgaaattaatccatttatagtatgtcaagtatgtggttcatatagaaga
ggtaaacaagattcaggtgatgttgacattttaattactctaaaacaagatgaaaatgat
aatcaattttcatcaattgaattatcatcaaatgaatcatcatcaattgaatcaaatgaa
ttgataactattaataatattaataataataataataataataataatcatattaataat
aatcataataataataatgaaaaaataataattgatggattattacaaaaaatagtaaca
aaacttgaagaaatgaaaataataactgatacattatcaatttcatgtaaaatacattta
aatcaagatgaaaatgatacatttatgggagtttattatttaccacaaattggaattcac
agaagaattgatattaaagtttataggagagaacattttgcatttgcattattatatttt
acaggttcagatcattttaatagatcattacgtttattatgtagaaagaagggttattct
ctaagtgataaatcattatgtataaatactattagagattcaaaatcaaatagaattcat
gatggtactaaaattaattgtaaaactgaaaatgatatttttaattttattggaatacca
tttaaagaaccaaaagatagagatgtttaa
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integrated database retrieval system
