KEGG   Naegleria gruberi: NAEGRDRAFT_63811
Entry
NAEGRDRAFT_63811  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
ngr  Naegleria gruberi
Pathway
ngr03030  DNA replication
ngr03410  Base excision repair
ngr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NAEGRDRAFT_63811
   03410 Base excision repair
    NAEGRDRAFT_63811
   03420 Nucleotide excision repair
    NAEGRDRAFT_63811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ngr03032]
    NAEGRDRAFT_63811
   03400 DNA repair and recombination proteins [BR:ngr03400]
    NAEGRDRAFT_63811
Enzymes [BR:ngr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NAEGRDRAFT_63811
DNA replication proteins [BR:ngr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    NAEGRDRAFT_63811
DNA repair and recombination proteins [BR:ngr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      NAEGRDRAFT_63811
SSDB
Motif
Pfam: DNA_pol_E_B DUF3659
Other DBs
NCBI-GeneID: 8861511
NCBI-ProteinID: XP_002680854
JGI: Naegr1_63811
LinkDB
AA seq 568 aa
MSANKAIASKLCVTAAKKYQFTLSNSALPDYCVNKLMSKDEINEFLPEFFKFLQDKNVKD
KNLSGELIEEKLKEFQSKRMDTSDDLVDDNTAVLGHRDAIQIINAEDKPFYSYNMSRKVF
EPEQRDTTFFSEVQQKVEVFRDRYKMIYQKVMRGKQFNPTDPNAISLTSIDSLLGSRGSK
YIMGLITRKSADIYQIEDLNGVTQVDISESTTNNRGTILEGSFVIASGVYDSVTKVFKAS
AIVLPTCEDRDDSERFLSVGRSSMLDMFGSSSPEKLKELKNKEDINKNAFIVVVSDVCLD
KPLVFEKLALLFEYIKWNQHNRTSEDSYELMPAMFLFIGNFISRPFQFYSSSSSSSTTSD
RVLYQKNFEKLAKMIEERFPNFIYNSKENENAPTFVFVPGPNDPTFSPNGVLPRSPILDS
ISRTFKSRIPNSFFATNPCRIRFYTQELVVFRQDLQQQMRRHTVIEHKEETQIYQSMCET
VLAQSHLSPFAMHLQPVFWEQDHSLSLFPSPHSLILADRCQPFNTKVEGCTCFNPHSFPV
DFSFEIISPLSNQVETHKLPDLADQSKE
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgagtgcaaataaagccatcgcatcaaagctctgcgtgacggcagctaaaaagtaccaa
tttaccttgtcaaattcggcacttcctgattattgtgtaaataaattaatgagcaaggat
gaaatcaatgaatttttaccagaattttttaaatttttgcaggataagaatgttaaagat
aaaaatttatcgggcgaattaatagaagagaaattaaaagagttccaatccaagagaatg
gatacatcagatgatttagtggatgataatacagcagttcttggacacagagatgccatt
caaataattaatgctgaggataaaccattctattcctataacatgtcaagaaaggttttt
gaacctgaacaaagagatactaccttcttctcagaggttcaacaaaaggttgaagtattc
cgtgacagatataaaatgatttatcaaaaagtaatgagaggaaaacaattcaatccaaca
gaccctaatgcaatctctttaactagtattgattcacttttaggaagtagaggatcaaaa
tatattatgggattaattacaagaaagtctgcagacatttatcaaattgaagatttgaat
ggtgtcacacaggttgatatttctgagtcaacaactaataatagaggaacgattttggaa
ggatcttttgttattgcttcaggtgtttatgatagtgtgacaaaggtattcaaagcatct
gctattgttttaccaacttgtgaagatagagatgatagtgaaagattcttatctgtggga
agaagcagcatgttggacatgtttggttcatcttcaccagaaaagttaaaagagctcaaa
aataaggaagatatcaacaagaatgccttcattgtggttgtttcagatgtttgccttgat
aagcctttagtatttgaaaagctagctctcttatttgaatatatcaagtggaatcaacac
aatagaacttctgaggactcatacgaattgatgccagcaatgtttttatttattggtaat
ttcatatctagaccattccaattctattcctcttcctcctctagttcaacaacctctgat
cgtgttttatatcaaaagaattttgaaaagcttgccaagatgattgaagaacgattccct
aatttcatttacaattccaaagaaaatgaaaatgctccaacgtttgtatttgtaccaggt
ccaaatgatccaacattctctccaaatggcgtacttccaagatctccaattttagatagt
atcagcagaacctttaaatcaagaattccaaacagcttctttgccacaaatccatgcaga
atacggttctacactcaagagcttgttgtattcagacaagatttacaacaacaaatgaga
agacacactgtgatagaacacaaggaggaaactcaaatttatcaatcaatgtgtgaaaca
gttcttgcacaatctcatttgagtcccttcgccatgcatttacaacctgtattctgggaa
caagatcactcattgagtctattcccatctccacattcactcattctagccgatagatgc
caaccattcaatacaaaagtcgaaggttgtacctgtttcaatccacattcattccctgtt
gatttttcatttgaaataatttcgccactctccaatcaagtagaaacacacaaacttcct
gatctagccgatcaatccaaagaataa

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