Naegleria gruberi: NAEGRDRAFT_64610
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Entry
NAEGRDRAFT_64610 CDS
T01241
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_64610
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_64610
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
NAEGRDRAFT_64610
RSC complex
NAEGRDRAFT_64610
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
NAEGRDRAFT_64610
SWI/SNF complex
NAEGRDRAFT_64610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
ResIII
QLQ
SnAC
PNISR
DUF7366
DUF1494
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
8860402
NCBI-ProteinID:
XP_002680029
JGI:
Naegr1_64610
UniProt:
D2V6Z5
LinkDB
All DBs
AA seq
1283 aa
AA seq
DB search
MDKQLSSQQLQLYMGLLKRLKSEGKDLNDPQYKSLHQFLKAQLNNQNQMKQQNQQTINNV
LPTPVQPSLATINPQTLQQQQPQQQQSLFTTQQKERLKAQIYAFKHHISKREPIPTSLQF
AIMGNNVENNLKEYETVYLKQGAPQSTTTTTNVGPVIPQPLQQQPNNVQLNTQLRKVQPN
QPNQPQPFVNPNGQMIQAPNIPNQHVQMNAAKQMESKINPDSQRQQNLDLQTLYKEREKR
IQHKMKRRFDNLKMSFTSLPQNEQVKAAIEIKQFQLLKQQKELRADIIRQLKNQSVTQNG
ESHIARTQSLVNEIPKKNRSTKPKEKNTNKSKKAILADLIAKKKKIKEAFKNDIKKPVDK
INKDLTQFFEKKAKAEKEKKAKAEKARLKALKENDEEAYFKLLEQTKEGRLTELLKQTDS
CLKSLGASLVSERDGDAEVVEFDQEEDGEKGGSLFKKFLLNQNNYYKVAHRLVEKVEKQP
TILKGGDLKAYQIQGLQWLVSLYNNRLNGILADEMGLGKTIQTISLLSYLYEFKSNKGPH
LVIVPLSTMDNWANEFEKWCPTLKLIRYSGTKQERQKIHLELKKQDFEVLLIQYEYITKE
KKFMKKIQWNYIIMDEGHRIKNSDCKLVKALAEYTSRNRVLLTGTPLQNDLKELWALLHF
LLPKIFDSSLNFENWFNSPFAASGEKVEMTEEEKLLIIHRLHQVLRPFLLRREKTDVEEQ
LPEKSEKVVYIDLSAMQKTLYQNIQDKNKIVLNGKKLRNTSLNNTVMQLRKVCNHPYLFF
KETEYLNNLSDETYYDWMCRSSGKFELLSRIFPKLKRTGHRVLLFSQMTQILDIFEEFLS
HLGYEYLRLDGAVNAADRGTLVKQWNAKDSPYFVFLLSTRSGGLGLNLQTADTVIMFDSD
WNPQQDLQAMARAHRIGQTKSVLVLTFCTRTPVEEKVRDRAQEKRDAEAKVIKAGKFNQK
STILERQELLETLLKKESDIYSAHEAPSDEQMNNLLARSDDEFEIFQTMDKEQEAQLIEK
YGENVPPRLMSADELPSWIREVGEEEEEEKEELGRGRRKRAESSIIDSSDEEDGDEDDEE
VAEPEEEPEEEEEEEENTKKRKRKAPVKKEEPAAKKKKAPGPGRGRKKKVVEEEPTLGYS
YDGKSYDKVLADLSDTVTKKLYQIYMDIGNTTDDTGKSLVFPFLELPNKEEYPTYYEIIK
NPICLHDIERKVRNGSYLGIDDMERDVKLLVSNAKTYNLEGSPIYVDAETIEQLFIRKKT
LIFNAVSADELIDEMDDNDLPPF
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacaactttcttctcaacaacttcagttgtatatgggcttgttgaagaggttg
aagagtgaaggaaaggatttgaatgacccacaatataaaagtcttcatcaattcttgaaa
gcacaacttaacaatcaaaatcagatgaaacaacaaaatcaacagacaattaacaatgtg
cttccaacacccgtacaaccttcactagcaaccatcaatccacaaactctacaacaacaa
caaccacaacaacaacaaagtttgttcactacacaacaaaaggaaagattgaaagcacaa
atctatgcttttaaacatcacatttctaagagagaaccaattcctacttctttacaattt
gctatcatgggcaacaatgttgagaataatttgaaggaatatgaaacagtttacttgaag
caaggtgctccacaatcaacaacaacaacaacaaatgtaggaccagtcattccacaacct
cttcaacaacaaccaaacaatgttcaattaaatactcaactccgtaaagtgcaaccaaat
caaccaaatcaaccacaaccatttgttaatccaaatggacaaatgatccaagcaccaaat
attcctaatcaacatgttcaaatgaatgctgccaaacaaatggaatcaaagataaatcca
gatagtcaaagacaacaaaatctagatcttcaaaccttgtacaaggaaagagaaaagaga
attcaacacaagatgaaaagaagatttgataatctcaagatgagttttacttctcttcca
caaaatgagcaagttaaagcagctattgagattaaacaattccaattacttaaacaacaa
aaagaattaagagcagatattattcgtcagctaaaaaaccagtcagtgactcaaaacggt
gagagtcatattgcaagaacccaatccttggttaatgaaattccgaagaaaaatagatca
actaaaccaaaggaaaagaatactaacaaaagtaagaaggcaatcctagccgatttgatt
gctaagaaaaagaagatcaaggaagccttcaagaatgatatcaagaagccagtagataaa
attaacaaagatttgacacaattctttgaaaagaaggcaaaggctgaaaaggaaaagaaa
gctaaagctgaaaaggccagattgaaggctttgaaagaaaatgatgaagaagcctacttt
aaattattggaacaaacaaaggaaggaagattgaccgaattacttaaacaaacagattca
tgtcttaaaagtttgggagcatctttggtctctgaaagagatggtgatgctgaagttgta
gaatttgatcaagaagaggatggtgaaaagggtggatcattgtttaagaaattcttactc
aaccaaaacaattactataaggttgcccacagacttgttgaaaaagttgaaaaacaacca
acaattcttaaaggaggtgatcttaaagcataccagatacaaggtttacaatggcttgtt
tctctttataacaatagattgaatggtattttagctgatgaaatgggtctcggtaagaca
attcaaaccatttcacttttatcatatctttacgagtttaaaagtaacaagggtccacac
ttggtaattgtaccattgtcaactatggacaattgggctaacgaatttgaaaaatggtgt
ccaactttaaagttaataagatatagtggtaccaaacaagaaagacaaaaaattcattta
gagttgaagaaacaagactttgaagttttattgatccaatatgaatatattaccaaagaa
aagaaattcatgaaaaagattcaatggaattatattatcatggatgaaggtcacagaatt
aagaactctgattgtaaattagttaaagctctcgctgagtatacttcaagaaacagagtt
ttgcttactggtactcctcttcaaaacgacttgaaagagttgtgggcacttcttcatttt
ttattacctaagatttttgatagctctctcaactttgaaaattggttcaattctcctttt
gctgcttctggtgaaaaggtagaaatgacagaagaagaaaaacttcttattattcacaga
cttcaccaagttcttcgtcctttcctcttgagaagagaaaagacagatgttgaagaacaa
ttacctgaaaaatcagaaaaggttgtttatatcgatttatcagccatgcaaaaaacattg
tatcaaaatattcaagataagaataagattgtattgaatggtaagaaactcagaaataca
tctctgaacaatactgttatgcaacttagaaaagtttgtaaccacccttatttattcttc
aaagaaactgagtatttgaataatttgagcgatgaaacttactatgattggatgtgtaga
tcatctggtaaatttgaattattatcaagaattttccctaagttgaagagaactggtcac
agagttttgttgttcagtcaaatgacccaaattcttgatattttcgaggaatttttatct
catcttggttatgaatatcttagacttgacggtgctgttaatgcggctgatagaggtacc
cttgtcaagcaatggaatgccaaggattctccatattttgttttcttgctgagtacacgt
tcaggtggtttgggtcttaaccttcaaactgctgatactgttatcatgtttgatagcgat
tggaatcctcaacaagatttgcaagctatggccagagctcaccgtattggtcaaactaag
tctgttttggttcttacattctgtacacgtactcctgtagaagaaaaagtcagagatcgt
gcccaagaaaaaagagatgcagaagccaaggtcattaaggctggtaaattcaatcaaaaa
tctacaattttggaaagacaagaacttttggaaacccttctcaagaaagaaagtgatatt
tacagtgctcacgaagctccttctgatgaacaaatgaacaatttgttagcaagaagtgat
gatgaatttgaaatcttccaaactatggataaggaacaagaagcacaacttatcgaaaaa
tatggtgaaaatgttcctcctcgtttgatgtctgctgatgaacttccatcatggataaga
gaagttggtgaggaagaggaagaagaaaaggaagaacttggaagaggtagaagaaaacgt
gccgaatcatcaatcattgactcaagtgatgaagaagatggagatgaagacgatgaagaa
gtagctgaaccagaagaagaacctgaggaagaagaagaggaagaggaaaacacaaagaag
agaaagagaaaggcaccagtaaagaaagaagaaccagcagcaaagaaaaagaaagcacct
ggtccaggaagaggtagaaagaagaaagtagttgaagaagaaccaactcttggatattct
tatgatggtaaatcatatgataaagttcttgctgatttgagtgatacggtaactaagaaa
ctttatcaaatctacatggatattggtaatacaactgatgatactggaaaatctcttgtt
tttcctttcttagagcttcctaacaaggaagaatacccaacttactatgaaattattaag
aatcctatttgtttgcatgacattgaaaggaaggttagaaatggtagttatttaggaatt
gatgatatggaaagagatgtcaaattattggttagtaatgccaagacttataatctcgaa
ggatccccaatttatgtggatgctgaaaccattgaacaattattcattaggaaaaagact
ttaattttcaatgcagttagtgctgatgaattaattgatgaaatggatgataatgatttg
ccacctttttaa
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integrated database retrieval system
