Naegleria gruberi: NAEGRDRAFT_68293
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Entry
NAEGRDRAFT_68293 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
ngr
Naegleria gruberi
Pathway
ngr03082
ATP-dependent chromatin remodeling
ngr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NAEGRDRAFT_68293
03083 Polycomb repressive complex
NAEGRDRAFT_68293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_68293
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
NAEGRDRAFT_68293
Histone modification proteins
HAT complexes
HATB complex
NAEGRDRAFT_68293
HDAC complexes
Sin3A-HDAC complex
NAEGRDRAFT_68293
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
NAEGRDRAFT_68293
PRC2.2
NAEGRDRAFT_68293
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
NAEGRDRAFT_68293
Heterochromatin formation proteins
Other heterochromatin formation proteins
NAEGRDRAFT_68293
Chromatin remodeling factors
NuRD complex
NAEGRDRAFT_68293
NuRF complex
NAEGRDRAFT_68293
NuRF complex (fruit fly)
NAEGRDRAFT_68293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_NOL10_N
DNAI3_WD
Beta-prop_WDR19_1st
PAC11
eIF2A
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_DCAF4
CFAP251_N
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_WDR41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
8847692
NCBI-ProteinID:
XP_002676671
JGI:
Naegr1_68293
UniProt:
D2VH67
LinkDB
All DBs
AA seq
420 aa
AA seq
DB search
MSSDDLKEEKIINEEYKIWKKNTSFLYDLILTHALEWPSLTVEWLPEIRHFDRHTSQKLI
LGTHTSQSEQNYLLLADVELPTNNSDVDIRKYDTNGDSGSLGTIGRGKVEITQRINHEGE
VNRARYMPQQTEYIATKSVNGQVLIFKYTDFESIPKTTQCTPTLRLKGHTQEGYGLCWSY
KKEGLIASGSDDCKVCVWDIFAQQNQIDKGCLQPLLTMEGHSGVVEDVAWHRLHEYLLGS
VCDDKHVRIFDTRSQTSTKAAHTVEAHKAEVNCIDFSPYSEYVFATGSADKTVKLWDMRN
LKSELHTLESHTDEVFSVSWSPSNETILASCGTDRRVMIWDISRIGMEQSPEDSEDGPPE
LLFIHGGHTSKISDFSWNPNEGGEWTIASVAEDNILQIWQPSDSIYMEDDNENVADNELQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgacgatttaaaggaagagaagattattaatgaagaatataaaatttggaag
aagaatacatcgtttttgtatgatctgattcttacacatgcccttgaatggccatctctc
actgttgaatggttaccagaaattagacattttgatcgtcatacctcccaaaagcttatc
ctaggaacccacacttcacaatctgaacaaaattatcttttattggccgatgttgaattg
ccaaccaataattctgatgttgatattagaaagtatgataccaatggcgattctggatct
ctaggaactatcggcagaggaaaggttgaaattactcaacgtattaatcatgaaggagaa
gttaacagagctcgttatatgcctcaacaaactgagtacattgccacaaagtctgtcaat
ggacaagttttaattttcaaatataccgattttgaaagtattcctaaaacaactcaatgt
acaccaaccttaagattgaagggtcacacacaagaaggatatggcttatgttggagttac
aagaaggaaggtctgatagcaagtggaagtgatgattgcaaagtttgtgtttgggatatt
ttcgctcaacaaaatcaaattgataagggatgtttacaaccattgttgactatggaagga
cattctggtgttgttgaagatgttgcttggcatagacttcatgaatatttgctgggctca
gtttgtgacgacaaacatgttcgtatctttgatactcgttcacaaactagtacaaaagct
gcccatacagttgaagctcacaaagctgaagttaattgtattgatttttcaccatacagt
gaatatgtttttgcaactggttctgccgataagactgttaaattgtgggatatgagaaac
ctcaaatctgaactccacactttagaaagtcacactgatgaagttttctctgtttcttgg
tctccatctaatgaaactattttggcttcttgtggtactgatagaagggttatgatctgg
gatatttcaagaattggaatggaacaatcacctgaagactcagaagatggtcctccagaa
cttctctttattcatggtggtcacacatctaaaatttctgacttctcttggaatccaaat
gaaggaggagaatggactattgcttctgttgcagaagataacattcttcaaatttggcaa
ccttctgattctatttacatggaagatgataatgaaaatgttgctgataatgaacttcaa
taa
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