Naegleria gruberi: NAEGRDRAFT_68603
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Entry
NAEGRDRAFT_68603 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ngr
Naegleria gruberi
Pathway
ngr03022
Basal transcription factors
ngr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NAEGRDRAFT_68603
09124 Replication and repair
03420 Nucleotide excision repair
NAEGRDRAFT_68603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_68603
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_68603
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NAEGRDRAFT_68603
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NAEGRDRAFT_68603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
DUF4428
DZR_2
Motif
Other DBs
NCBI-GeneID:
8853126
NCBI-ProteinID:
XP_002676214
JGI:
Naegr1_68603
LinkDB
All DBs
AA seq
346 aa
AA seq
DB search
MDTGFQSVNITDELELLVILLDINPYTWGKRKLDNEQQQSSSAKSLISFSQFINQLLVFI
NTFLTIQRNKKIAVIASSENNKSHFLFPNRFRSKKDGKHNHNQIQVKSTDSTSMLNMMGV
KSGDDIEDFFLNDIGFESVQNAVLSGLNSEEVTPSEDTEYMEDDGNHTTSTAQGFSLSGA
LSMALCFINRLEKEKPLGMSLNSRILTFQVSPDISSQYISVMNAIFSAEKMSIMLDACVL
SNDDSTFLQQACFLTGGNYLKPQRQEGLIQYLLTIFMLEKSLRSYIQLPVQNTVDFRASC
FETRKPIDDGYVCPVCLSIFSSHKPVCSTCASKLQRPTNRSVLSYK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggctttcaatcggtaaatattactgatgagttggagttgctggtgattctt
ctagatattaatccgtatacgtggggaaaaagaaaattggacaatgaacaacaacaatca
tcatcagcaaaaagtttaatttccttctcacaatttataaatcaacttcttgtattcatt
aacactttcctaactattcagagaaataagaaaatagcagttattgctagttcggaaaac
aacaaatcacattttctatttccgaatagatttagatcaaagaaggatggtaaacataac
cataatcaaattcaagttaagagtactgatagtacaagtatgttaaacatgatgggtgta
aaatcaggagatgatatcgaagatttcttcttgaatgatattggttttgagagtgtacaa
aatgcagtcttatccggattaaatagtgaagaagttactccgagtgaagacactgaatat
atggaagatgatggcaatcacaccacttcaacagcacagggtttctccctcagtggtgcc
ttgtctatggctttgtgttttattaacagattggaaaaggaaaaacctttgggaatgtca
ctcaattctagaattttaacattccaagtttctcctgatatttcatcacaatatatttct
gtcatgaatgccattttctcagcagagaaaatgagtatcatgttagatgcttgtgtttta
tcaaatgatgattccacatttttacaacaagcttgcttcttaactggaggaaattatttg
aaacctcaacgacaagaaggtttaattcaatatttattaactattttcatgttggaaaag
agtcttcgttcttatattcaattacctgtacaaaatactgtagatttcagagcaagttgt
ttcgaaactagaaagccaattgatgatggttatgtttgtcctgtttgtttatcaattttc
agttctcacaagccagtctgttctacctgtgcctctaagttacaaagaccgaccaataga
tctgtactttcgtacaagtaa
DBGET
integrated database retrieval system
