Naegleria gruberi: NAEGRDRAFT_68675
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Entry
NAEGRDRAFT_68675 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
ngr
Naegleria gruberi
Pathway
ngr03030
DNA replication
ngr03410
Base excision repair
ngr03420
Nucleotide excision repair
ngr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NAEGRDRAFT_68675
03410 Base excision repair
NAEGRDRAFT_68675
03420 Nucleotide excision repair
NAEGRDRAFT_68675
03430 Mismatch repair
NAEGRDRAFT_68675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngr03032
]
NAEGRDRAFT_68675
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_68675
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_68675
DNA replication proteins [BR:
ngr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NAEGRDRAFT_68675
DNA Replication Termination Factors
ELG1-RFC complex
NAEGRDRAFT_68675
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
NAEGRDRAFT_68675
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NAEGRDRAFT_68675
Check point factors
HRAD17(Rad24)-RFC complex
NAEGRDRAFT_68675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND_NTPase5
AAA_22
Mg_chelatase
AAA_16
RCF1-5-like_lid
AAA_11
nSTAND3
AAA_28
AAA_19
AAA_5
DEAD
AAA_30
Viral_helicase1
ATPase_2
AAA_33
Rad17
RuvB_N
RNA_helicase
AAA_7
NTPase_1
AAA_assoc_2
KTI12
bpMoxR
AAA_25
FtsK_SpoIIIE
AAA_3
NPHP3_N
AAA_18
ABC_tran
SLFN-g3_helicase
IstB_IS21
MipZ
AAA_lid_RFC1
AAA_RNF213_4
Motif
Other DBs
NCBI-GeneID:
8852142
NCBI-ProteinID:
XP_002676098
JGI:
Naegr1_68675
UniProt:
D2VIG6
LinkDB
All DBs
AA seq
337 aa
AA seq
DB search
MIASNSSSSGVPTEMDRPWVERYRPIDMDDIVGNEEAVMRLRVIAEEGNMPNLILSGPPG
TGKTTSIMCLARSLLGKEVYKEAVLELNASDERTLDVVRNKIKQFAQKKVNLPPNRHKIV
ILDEADSMTSAAQQAMRRIMEIYSSTTRFALACNDSSKIIEPIQSRCALVRYKRLTDAEL
LTRLIVICELEHVQKTEDGLESILYTSDGDMRNAINSLQATYQGFGIVNATNVFKVCDQP
HPVAIQTIIGSCIQGDLMSSQKELTKLMGEGYSSQDVISTLSKVVRSGAVQMPEYAQLQF
IKEIGDCHLRISDGVDTPLQLTALLARLCKIIITSKK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattgcatcaaattcttcttcttcaggtgtgccaacagaaatggacagaccttgggtt
gaaagatatcgtcccattgatatggatgatattgtcggaaacgaagaggctgtcatgaga
cttagagttattgctgaggaaggtaatatgccgaatctgattttgtctggaccaccaggt
actggtaaaacaacgagtataatgtgtttagctagatcattattgggaaaggaagtatat
aaagaagctgttttagaattgaacgcttctgatgaaagaacacttgatgttgtgagaaac
aaaattaaacaatttgctcaaaagaaagttaatcttccaccaaatagacacaaaatagtt
attttggatgaagctgattcaatgacatcagctgctcaacaagctatgagacgtattatg
gaaatttattcttcaacaactagatttgctcttgcttgcaatgatagctctaaaattatt
gaaccaattcaatcaagatgtgctctcgtcagatataagaggctgacagatgctgaactc
ttgaccagattaattgttatttgtgaattagaacatgtccaaaaaacagaggatggtttg
gaatcaattctctatacttcagacggtgacatgagaaatgcaattaatagtttacaagct
acctatcaaggttttggaattgtaaatgccactaatgttttcaaagtttgtgatcaacct
catccagttgctattcaaacaattattggatcatgtattcaaggtgatttaatgagttct
caaaaagagcttactaaattaatgggtgagggatacagttctcaagatgtaatttctact
ctttccaaagttgttagaagtggagctgtccaaatgcctgaatatgctcaattacaattt
atcaaagagattggtgattgtcatttaaggataagtgatggtgttgatacacctcttcaa
cttacagcactcttggcaagattatgtaaaattataataacaagcaaaaaataa
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