KEGG   Naegleria gruberi: NAEGRDRAFT_68675
Entry
NAEGRDRAFT_68675  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
ngr  Naegleria gruberi
Pathway
ngr03030  DNA replication
ngr03410  Base excision repair
ngr03420  Nucleotide excision repair
ngr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NAEGRDRAFT_68675
   03410 Base excision repair
    NAEGRDRAFT_68675
   03420 Nucleotide excision repair
    NAEGRDRAFT_68675
   03430 Mismatch repair
    NAEGRDRAFT_68675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ngr03032]
    NAEGRDRAFT_68675
   03036 Chromosome and associated proteins [BR:ngr03036]
    NAEGRDRAFT_68675
   03400 DNA repair and recombination proteins [BR:ngr03400]
    NAEGRDRAFT_68675
DNA replication proteins [BR:ngr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    NAEGRDRAFT_68675
  DNA Replication Termination Factors
   ELG1-RFC complex
    NAEGRDRAFT_68675
Chromosome and associated proteins [BR:ngr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    NAEGRDRAFT_68675
DNA repair and recombination proteins [BR:ngr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     NAEGRDRAFT_68675
  Check point factors
   HRAD17(Rad24)-RFC complex
    NAEGRDRAFT_68675
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_22 Mg_chelatase AAA_16 RCF1-5-like_lid AAA_11 nSTAND3 AAA_28 AAA_19 AAA_5 DEAD AAA_30 Viral_helicase1 ATPase_2 AAA_33 Rad17 RuvB_N RNA_helicase AAA_7 NTPase_1 AAA_assoc_2 KTI12 bpMoxR AAA_25 FtsK_SpoIIIE AAA_3 NPHP3_N AAA_18 ABC_tran SLFN-g3_helicase IstB_IS21 MipZ AAA_lid_RFC1 AAA_RNF213_4
Other DBs
NCBI-GeneID: 8852142
NCBI-ProteinID: XP_002676098
JGI: Naegr1_68675
UniProt: D2VIG6
LinkDB
AA seq 337 aa
MIASNSSSSGVPTEMDRPWVERYRPIDMDDIVGNEEAVMRLRVIAEEGNMPNLILSGPPG
TGKTTSIMCLARSLLGKEVYKEAVLELNASDERTLDVVRNKIKQFAQKKVNLPPNRHKIV
ILDEADSMTSAAQQAMRRIMEIYSSTTRFALACNDSSKIIEPIQSRCALVRYKRLTDAEL
LTRLIVICELEHVQKTEDGLESILYTSDGDMRNAINSLQATYQGFGIVNATNVFKVCDQP
HPVAIQTIIGSCIQGDLMSSQKELTKLMGEGYSSQDVISTLSKVVRSGAVQMPEYAQLQF
IKEIGDCHLRISDGVDTPLQLTALLARLCKIIITSKK
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgattgcatcaaattcttcttcttcaggtgtgccaacagaaatggacagaccttgggtt
gaaagatatcgtcccattgatatggatgatattgtcggaaacgaagaggctgtcatgaga
cttagagttattgctgaggaaggtaatatgccgaatctgattttgtctggaccaccaggt
actggtaaaacaacgagtataatgtgtttagctagatcattattgggaaaggaagtatat
aaagaagctgttttagaattgaacgcttctgatgaaagaacacttgatgttgtgagaaac
aaaattaaacaatttgctcaaaagaaagttaatcttccaccaaatagacacaaaatagtt
attttggatgaagctgattcaatgacatcagctgctcaacaagctatgagacgtattatg
gaaatttattcttcaacaactagatttgctcttgcttgcaatgatagctctaaaattatt
gaaccaattcaatcaagatgtgctctcgtcagatataagaggctgacagatgctgaactc
ttgaccagattaattgttatttgtgaattagaacatgtccaaaaaacagaggatggtttg
gaatcaattctctatacttcagacggtgacatgagaaatgcaattaatagtttacaagct
acctatcaaggttttggaattgtaaatgccactaatgttttcaaagtttgtgatcaacct
catccagttgctattcaaacaattattggatcatgtattcaaggtgatttaatgagttct
caaaaagagcttactaaattaatgggtgagggatacagttctcaagatgtaatttctact
ctttccaaagttgttagaagtggagctgtccaaatgcctgaatatgctcaattacaattt
atcaaagagattggtgattgtcatttaaggataagtgatggtgttgatacacctcttcaa
cttacagcactcttggcaagattatgtaaaattataataacaagcaaaaaataa

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