Naegleria gruberi: NAEGRDRAFT_70083
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Entry
NAEGRDRAFT_70083 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngr03016
]
NAEGRDRAFT_70083
Enzymes [BR:
ngr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NAEGRDRAFT_70083
Transfer RNA biogenesis [BR:
ngr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
NAEGRDRAFT_70083
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
8862658
NCBI-ProteinID:
XP_002674706
JGI:
Naegr1_70083
UniProt:
D2VMC3
LinkDB
All DBs
AA seq
148 aa
AA seq
DB search
MSYNQSTEKYSQEPKDITHLWKHPYTPSEKNKYEVFKDLHSNCGFFLTSGDKFGCDFLAY
KGDPVLHHAEFLVYVQEYDKPIESFQMISIGRLANNVHKTVLFASWNPQSNQVEYLNMNW
FNPQPIKTWKIKELCNKYKQELNNQTSH
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaatcagtcaactgagaaatactcacaagaacctaaagatattactcatttg
tggaagcatccttatactccttctgaaaaaaataagtatgaagtatttaaggatttacat
tcgaattgtggattcttccttacgagtggtgataaatttggatgtgatttcttggcctat
aagggagatccagttctccaccatgcagaatttctggtctatgttcaggagtatgataaa
ccgattgaatcattccaaatgattagtattggaagattggccaacaatgttcacaaaact
gtactctttgcatcgtggaatcctcaatccaatcaagtggaatatttaaatatgaattgg
ttcaatcctcagcccatcaaaacttggaaaatcaaagaattatgtaacaagtacaaacaa
gaacttaacaaccaaacctctcattaa
DBGET
integrated database retrieval system
