Naegleria gruberi: NAEGRDRAFT_70095
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Entry
NAEGRDRAFT_70095 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ngr
Naegleria gruberi
Pathway
ngr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NAEGRDRAFT_70095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_70095
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NAEGRDRAFT_70095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
8851583
NCBI-ProteinID:
XP_002674713
JGI:
Naegr1_70095
UniProt:
D2VMD5
LinkDB
All DBs
AA seq
384 aa
AA seq
DB search
MSTPADSVTPTDHTTTTTSMEDDPQNTVVTSNSREQEDKAMAALDLFGDHDGGVTKITTT
TSGDNNNMADEDDDDDDDLSDDDDDGVTFVTSTETAAQAATTKPTEVTQIAIGDSKNNVK
SQANKSVDSQSINGDQFKGSGYVELFPLKMNENVFFNDLQNYEDKPWRKPGADITDYFNY
GFNEETWELYIQKQRELRGVYSSNSERSKYESRDQRGSSRDPRSSGKDDRSGRPPASPVS
TTSSNSDDRRYDRRDDDRYGRRYDRRDDRRDDRRDDRPRDDKRDIKKDNTPTRDSDYNDK
KRPISSLESPKSSSSNRDSRDSRDSRDSRDGRDSKPYGGKDSYYGGDRGRGGSSSGGRGG
SSYGGSSSSSSGGNRGGDPKKQKR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccagcagattctgttactcccaccgatcatacaactacaacaacatcaatg
gaggatgatccacaaaatacagtagtaacatcaaattctcgtgaacaggaggataaagcg
atggctgctttggatttattcggagatcatgatggtggtgtaacaaaaataacaacaaca
acaagtggtgataataataatatggctgatgaagatgatgacgatgatgatgatttatct
gatgatgatgacgatggagttacttttgtgactagtacagaaactgcagcacaagcagct
acaacaaaaccaacagaagttacacaaattgctatcggtgattctaaaaacaatgttaaa
agtcaagctaacaaatctgtggattcacaatcaattaatggagatcaatttaaaggaagt
ggttatgtagaactttttccactcaagatgaatgaaaatgtcttcttcaatgatttacaa
aattatgaagataaaccttggagaaaacctggagcagatattacagattattttaattat
ggttttaatgaggaaacatgggaattgtacattcaaaaacaaagagaattgagaggagtt
tattcatcaaattccgaaagaagtaaatatgagtcgagggatcaaagaggttcttctagg
gatcctcgttcatcaggaaaggacgatagatctggaagaccacctgcctctcctgtcagt
acaactagtagcaatagtgatgatagacgatatgatagaagagacgatgatagatatgga
agaagatatgatagaagagatgacagaagagacgatagaagagacgacaggccaagagac
gataagagagacattaagaaagataataccccaactagagattcagattacaatgataag
aagagacctatttcatctttggaaagtccaaaatcttcttcatcaaacagagatagtagg
gatagtagggacagtagagatagtagagacggaagagactcaaagccttatggaggaaaa
gatagctactatggtggcgatagaggaagaggtggatcaagcagtggtggacgaggagga
agctcttatggaggtagctcaagtagtagcagtggtggcaatagaggaggagatcctaag
aaacaaaaacgttaa
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