Naegleria gruberi: NAEGRDRAFT_70927
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Entry
NAEGRDRAFT_70927 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ngr
Naegleria gruberi
Pathway
ngr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NAEGRDRAFT_70927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_70927
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
NAEGRDRAFT_70927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ZGRF1-like_N
DEAD
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
8851119
NCBI-ProteinID:
XP_002673901
JGI:
Naegr1_70927
UniProt:
D2VPN6
LinkDB
All DBs
AA seq
873 aa
AA seq
DB search
MKRKFVTPFKNPPPPKAEDKSSATPTTTDVAKSSQSNASQDVPKANSTTTTTAKKKFVPP
TRTKPSEPTSTSNANNNNNNSSNNDEEEGEVWMVMHTKNSNKKHKTFDDGFLLIRNKKYT
LFDSQGKQLIAKSVSKVETFRENDQLTLGTKLVDFQSKLKMEDYISGRIFLQYQSNITTP
KVNTISSAAKTEFKRHTTSKTAGLGYNNTEVQVIKAPEGAYILNENHPEKDKNGKKLSDV
FIDNFLGENLRPHQVEGVKFMYECAMGLKDFVGKGCLLADEMGLGKTLQTITLIYTLLRR
GPFGSPIIKKAIVVTNSSLVKNWTSEFDKWVGEDKIKVLTVTTKTAKQSPSETLKIFKAG
YHQVLIISYNLCTNYVEELQDCQCDILICDEGHKLKNANIKIFQTLKKISTPRRIVLSGT
PLQNDLNEFFTICDFINPGLLGDATSFKNLFTEPIKKSQEPNAKKQDKVIGENRSKELNK
IVSQFVLRRTNLLLRQHLPPKMEIVLFCGMTELQENLYKHFVLSKALRGVINGTLDSNNA
LACIMHLKKLLAHPNMIYPQENNEEKEEEDNELFDDIWTQSKKHFPSDYNPNDKKEYHSQ
YSGKLLVLDNLLREIREVGDRVVIVSNFKSILNEIEKLCKIRDYPLSRLDGSTQSEKRMV
IVNSFNSPKSNDFIFLLSSKAGGCGLNLIGANRLIMIDPDWNPSNDEQAMARVWRDGQKK
SVFIYRMIGCGTIEEKIFQRQIVKTGLSKSTLDEKSLKSQFSSEMLKELFKYDNDMDCKT
YPADSNDLDAIKEKDEVLAKVLDEEDVKIPFVKITLDTEDSKNQSNETTEESNVEDEEES
SEEDSLESDTKKRKIDMEEGEEEFKFIDEDEDE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaagtttgtcacacccttcaagaatccacccccaccaaaggctgaagacaaa
tcgagtgcaacaccaacaacaaccgatgtagctaaatcttcacaatcaaatgctagtcaa
gatgttccgaaggctaattcaacaactacaacaacagcaaagaaaaagtttgtcccacca
acaagaacaaagccttcagaacctacctctacctccaatgctaacaataataataataat
agttcaaataatgatgaagaggagggagaagtgtggatggtcatgcatacaaagaattca
aataagaaacataaaacatttgatgatggtttcttattgataaggaacaaaaagtacaca
ttgtttgattcacagggaaaacaattgattgccaagtctgtttctaaagtagaaactttc
cgagaaaatgatcagctcacccttggaactaaactagttgattttcaatccaagttgaaa
atggaggattacattagtggtagaatattccttcaatatcaatccaatatcacaacacct
aaagttaatacaatatcatcagctgccaagactgaattcaaacgtcatactacatccaag
actgcaggtttaggctacaataacacagaagttcaagttatcaaggcacctgaaggagcc
tacattttgaatgaaaatcatcctgaaaaggataagaatggaaagaaattatctgatgtt
tttattgataattttcttggagaaaatctcagacctcatcaagttgaaggtgtgaaattt
atgtacgaatgtgccatgggattgaaagattttgttggaaagggttgtttgttggcagac
gaaatgggtttaggtaaaacccttcaaaccattactttaatctatacattactcagaaga
ggtccatttggatcaccaattattaaaaaggccattgttgtaaccaattcatctctcgta
aagaattggaccagtgaatttgataaatgggttggagaagataaaatcaaagtattgaca
gttactaccaaaacagctaaacaatctccatccgaaactttaaagattttcaaagctggc
taccatcaagtattaatcatttcatataatctctgtaccaattatgtggaggaattgcaa
gattgtcaatgtgatatacttatttgtgatgaaggtcacaagttgaagaatgctaatatt
aagattttccaaactctgaaaaagatttctactccaagaagaatagtactcagtggtaca
cctttgcagaatgacttgaatgagttctttaccatttgtgactttatcaatcctggtttg
ttgggtgatgcaacatctttcaagaatctcttcactgagccaattaaaaagagtcaagaa
ccaaatgctaaaaaacaagacaaggttattggtgaaaatagatccaaagagttgaataag
attgtttctcaatttgttttgagaagaaccaaccttttattgagacaacatttacctcca
aaaatggaaattgtattattctgtggtatgactgaattacaagaaaatctttacaaacat
tttgtactctccaaagctctgagaggtgttattaatggtactttggattcaaacaatgca
ttggcttgtattatgcacttgaagaaattattagcacatccaaatatgatctacccacag
gaaaacaatgaagaaaaagaggaagaggacaatgaattattcgatgatatttggacccaa
tcaaaaaagcacttcccatctgactacaatccaaacgacaagaaagaatatcattcccag
tattctggaaagctacttgttcttgataatctattgagggaaatcagggaagttggagat
agagtagtaattgtttctaactttaaatctattctgaatgaaattgaaaaattgtgtaaa
ataagagactatcctttgagtagattggacggatcaactcaatcagaaaagagaatggta
attgtaaatagtttcaactcaccaaaatcaaatgactttatattcttgctttcatccaaa
gctggtggttgtggtctcaatttaattggtgctaacagacttattatgatagatcctgat
tggaatccaagtaatgacgaacaggccatggctcgtgtttggagagatggtcaaaagaag
agtgttttcatctatagaatgattggttgtggtactattgaagaaaagattttccaaaga
caaattgtcaagacaggtctgtctaaatctacccttgatgaaaagtctctcaaatctcaa
ttttcgagtgaaatgcttaaagagctgttcaaatatgataatgatatggattgtaaaaca
taccctgcggatagtaacgaccttgatgcaattaaggaaaaagatgaagttttagctaag
gtgttagacgaggaggatgtaaagattccttttgtcaagattacattggatactgaggat
tccaaaaatcaatcaaacgaaacaaccgaagaatcaaatgtggaagacgaagaagaatcc
agtgaagaggattcacttgaatcggatacaaagaagagaaagattgacatggaagaaggt
gaggaagagtttaaatttattgacgaagatgaggatgaataa
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