Naegleria gruberi: NAEGRDRAFT_71322
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Entry
NAEGRDRAFT_71322 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_71322
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_71322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_71322
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_71322
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
NAEGRDRAFT_71322
Spliceosome [BR:
ngr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NAEGRDRAFT_71322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Orai-1
Legum_prodom
Motif
Other DBs
NCBI-GeneID:
8864499
NCBI-ProteinID:
XP_002673436
JGI:
Naegr1_71322
UniProt:
D2VQR7
LinkDB
All DBs
AA seq
640 aa
AA seq
DB search
MSGEQNKANDEVENTTTTIITSSSSSDHNKQQQQQYEEITCIDKIIETFQDKCKQFKQHV
LNLNIAKQSSEETKSIFMEGYHKLLELQSLQIQINIFQKRMNDLRIERKKEMELPLLECN
NLSCEASYFQRDISICKNYYSRHVEIDLPSEDDEFKNRDKSSTILLEIEKLKQSSLNGID
SELLLKKQHELMMKRLTFELDEREKLEKEILEIKQEQEKAKQEQVNIEKYINNIPKNLAA
MKKTIQQFEPVINPSKHQHTDWFTNEELELMNQLPTPLFILYNKLMEYKKVYDDSILISI
VGDSERAKTIWNDSDLDESSFNTVNSNGNNNSSGGSGTGNSGTSNSGSGAGAGITPSYID
ELTGEPKRKKLKQVDNNSEMCSMFPLVIQLRVQLKFFEKNKKLLIEFGYLHKANMVVVNE
ARTAALVLPTLIQGDDGSISPNVQCMSDYDFSTFERGRPYRWLQQICGLEFISARISSNI
SSKENRPEESKNYSLSYILNLFKYKQKAKRYLLNQLKSLELNEPLKNEFPSCLSFVPKLE
SFKQTNVTYTSITFLITVRIDKYLFESELLVNVVDYPLKSPQFKKLTQIQPTIEQTIPEE
YQDLICHDNSIEIVREDSSWSNPLLYQIEKDINVKFSSFC
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagaacaaaacaaggctaatgatgaagtagagaatacaacaacaacaataata
acatcatcatcatcatcggatcataacaagcaacaacaacaacaatatgaagaaataaca
tgcattgataaaattatagaaacatttcaagataaatgtaaacaatttaaacaacatgta
ttaaatttgaatatagcaaaacaatcatcagaggaaactaaatcaatatttatggaaggt
tatcataaattattagaacttcaatcacttcaaatacaaattaatatatttcaaaaaaga
atgaatgatttaagaattgaaagaaagaaggaaatggaacttccacttttagaatgtaat
aatttatcatgtgaagcttcttattttcaaagagatatttcaatttgtaaaaattattat
tcaagacatgttgaaattgatttaccttctgaagatgatgaatttaaaaatagagataaa
tcatctactattttattagaaattgaaaaattaaaacaatcatcattgaatggaatagat
tctgaattattattaaaaaaacaacatgaattaatgatgaaaagattaacatttgaactt
gatgaaagagaaaaattagaaaaggaaattcttgaaattaaacaagaacaagaaaaggca
aaacaagaacaagttaatattgaaaaatatattaataatattccaaagaatttagctgca
atgaaaaagacaattcaacaatttgaacctgttattaatccatcaaaacatcaacatact
gattggtttacaaatgaagaacttgaattaatgaatcaattaccaactcctctatttatt
ttatataacaaattaatggaatataagaaagtttatgatgattcaattttaatatctata
gtaggtgattctgaaagagctaaaactatttggaatgattctgatttagatgaatcatct
tttaatactgttaatagtaatggtaataataatagcagtggtggaagtggtactggtaat
agtggtactagtaatagtggaagtggtgctggtgctggtataacaccatcatatattgat
gaattaacaggtgaaccaaagagaaaaaagttaaaacaagttgataataatagtgaaatg
tgtagcatgtttccacttgttattcaattaagagttcaacttaaattctttgaaaaaaat
aagaaattattaattgaatttggatatcttcataaagcaaatatggtagttgtaaatgaa
gcaagaacagcagcacttgttttaccaacattaatacagggagatgatggcagtatttca
ccaaatgttcaatgtatgtcagattatgatttttcaacatttgaaagaggaagaccatat
cgttggttacaacaaatatgtggattagaatttataagtgcaagaatatcaagtaatatt
tcatctaaagaaaatagaccagaagaatctaaaaattattcattaagttatattctaaat
ttatttaaatacaaacaaaaagctaaaagatatttgttaaatcaattaaaatcattggaa
ttgaatgaacctttaaagaatgaatttccatcatgcctttcatttgtacctaaattagaa
tcatttaaacaaactaatgttacatatacttcaattacatttttaattacagttagaatt
gacaagtatttatttgaaagtgaattattggtaaatgttgtggattatcctttaaaatct
ccacaatttaaaaaattaactcaaattcaaccaacaattgaacaaactattccagaagaa
tatcaagatttaatatgtcatgataattcaattgaaattgttagagaagattcttcatgg
tcaaatccattactttatcaaatagaaaaagatattaatgtcaaatttagcagtttttgt
tga
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integrated database retrieval system
