Naegleria gruberi: NAEGRDRAFT_71625
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Entry
NAEGRDRAFT_71625 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
ngr
Naegleria gruberi
Pathway
ngr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NAEGRDRAFT_71625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_71625
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
NAEGRDRAFT_71625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
TPR_16
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
NorB_cytochrome_c-like
Motif
Other DBs
NCBI-GeneID:
8851054
NCBI-ProteinID:
XP_002673155
JGI:
Naegr1_71625
UniProt:
D2VRL2
LinkDB
All DBs
AA seq
754 aa
AA seq
DB search
MSRDRYADQDDDYEQSSGGKNDKIQSAEARIELNKYDTEAWTILLSEVQEMSIIQARPYY
ERFFEIYPVAARYWKIYAEHELKAKNHTLAEEIFKKALDACPNFELWRFYLDYIREHKRN
DVDTIRKAFDICKEKVGLDISSSTLWIDNIKFIKDLKATDQNDIQNQINLLRSLYQEAIQ
IPMHDIEKIWKDYEIFENEVNPTNGKSTLQEFAPKFKLALNKYKEKKNIRENMGGVGGLL
LNMLATPPTNSEKERSQKQIWKDLIELEKRNSQRLTADELKRRVLFVYSQCFLCFRHHPD
IWYDAANYLISIQCHDEATIVFQRGCNALLPVPKSLDANQSQEGSILLHLAFSEYLESRK
LFDEAAKVFKTLITSKHDPLVFIQYIRFMRRTKGTEGAREAFIEVKKSPKCTYHVWVASA
LLEYTTNNQPETARKFFKLGQNQPFGKEPGFILEYLKFLDHLNDKNNSRVLFETILNELP
KEQSSEIWNRFLQFEYSIGDLNSIEKVEQRKLAAFSENAENNTPSNSGFENTVNATNSLI
NLINRSKFLDLWPCTPSEMELLNLKAQESEKVPTEDDIHIKYSKSFYRVDYTKQIMFTNT
RQQNQGSVDKLNSNRTAPPTVSLPPEFNKFRQYLNQKRLFLPDFKQMCEFKVIPNHVSQS
NSSLPLVTVHDEQVIPHTVLQILRRMPQQHFAVIPPDYVINALMTTPLPPPPESDLKRGR
NEYENVDYDQEYDDEGPADRAYDDIYTKRRKQRK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagacaggtatgctgatcaagatgatgactatgaacaatcatcgggtggcaaa
aacgacaagatacaaagtgctgaagcaagaatcgaacttaataagtatgacacagaagct
tggaccattttgttgtcagaagtacaagaaatgagcatcatccaagcaagaccatactat
gaacgattttttgaaatatatccagtagctgcaagatattggaaaatatatgctgaacat
gaattaaaagcaaagaaccatactctagctgaggaaatatttaaaaaggcattggatgct
tgccctaactttgaattgtggagattttatttggattatattagggaacataaaagaaat
gatgtggatacaattcgtaaagccttcgatatttgcaaagaaaaggttgggcttgatatt
tcaagctcaactctatggattgacaacattaaattcataaaagatcttaaagcaactgat
caaaatgatattcaaaaccaaatcaatcttttgagaagtctctatcaagaagctattcaa
attcctatgcatgatatcgaaaagatttggaaagattatgaaatttttgaaaatgaagtc
aacccaaccaatgggaaatcaactcttcaagaatttgctccaaagttcaaattggctctc
aataagtataaggaaaagaaaaatatcagagaaaatatgggtggagtaggaggtttatta
ttaaatatgttggcgacaccaccaacaaactctgagaaggaaagatcacaaaaacaaatc
tggaaggatttaatagaacttgaaaagagaaattcacaaagactaacagctgatgaactc
aaaagaagagttctttttgtttatagtcaatgcttcctctgttttagacatcatcctgat
atttggtatgatgctgctaattatttgatttctattcagtgtcacgatgaagcaacaata
gtttttcaacgtggatgtaacgcattattacctgttccaaaatcattggatgccaatcaa
tcacaagagggaagtattttactccatcttgcattttcagaatatttggaatcaagaaag
ctctttgacgaagcagctaaagttttcaaaactcttatcacatcaaaacatgaccctcta
gtttttattcaatatatcagatttatgagacgtaccaaaggaacagaaggagctagagaa
gcatttattgaagttaaaaaatctccaaaatgtacataccatgtgtgggttgcatcagct
cttcttgaatatactactaacaatcaaccagagactgcaagaaaatttttcaaactaggt
cagaatcaaccattcggaaaagaaccaggttttattcttgaatacttaaaattcctagac
catctaaatgataagaataactctagagttctttttgaaacaattcttaatgaattacca
aaagaacaatcctctgaaatatggaatagatttttacaatttgaatactcaataggcgat
ttgaattcgatagaaaaggttgaacaaagaaaacttgcagccttttcagagaatgctgaa
aataatacaccttctaatagtggtttcgaaaatacagtcaacgctaccaacagccttata
aatctcatcaatagaagcaagtttttagatttatggccttgtacacctagtgaaatggag
ttactcaatttgaaagcacaagaaagcgagaaagtgccaacagaagacgatatccatatc
aaatattctaaatcattttatcgtgttgattacacaaagcaaatcatgtttacaaacact
agacaacaaaatcaaggctcagtagataaactcaatagtaatcgtacagcacctccaaca
gtttctctccctccagaattcaacaaatttagacaataccttaaccaaaagagacttttc
cttccggattttaagcaaatgtgtgaattcaaagttattccaaaccatgtctcacaatct
aattcatcccttcccctagtaacagtacatgatgagcaagtaattcctcatacagtactt
cagattttaaggagaatgcctcaacaacattttgctgttattcctccagattatgttatt
aatgcattgatgacaactccacttccacccccacctgaatcagatcttaaaagaggtaga
aatgaatatgaaaatgttgattatgaccaagagtatgatgatgaaggtccagcagataga
gcctatgatgatatttacacaaagagaagaaagcaaaggaaataa
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