Naegleria gruberi: NAEGRDRAFT_72801
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Entry
NAEGRDRAFT_72801 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ngr
Naegleria gruberi
Pathway
ngr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NAEGRDRAFT_72801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_72801
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_72801
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NAEGRDRAFT_72801
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NAEGRDRAFT_72801
U7-dependent histone pre-mRNA processing factors
NAEGRDRAFT_72801
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B
Lactamase_B_6
CPSF73-100_C
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
DUF6047
ODP
Motif
Other DBs
NCBI-GeneID:
8853533
NCBI-ProteinID:
XP_002672131
JGI:
Naegr1_72801
UniProt:
D2VUV7
LinkDB
All DBs
AA seq
749 aa
AA seq
DB search
MISNTPSSNPPPSSSSATPQPVTITKNTPHTQYIYGEKLVVTPLGAGNEVGRSAVLLQFK
GKTVLFDCGIHPAFTGMASLPFFDTIEPSEIDLVLVTHFHLDHCGALPYFTEHTNFQGRV
FMTHPTKAIYKLLLTDFVKVSDVHVDDQLFTEQNLLDSLKKIELIDYHQELEHNGIKFWC
YNAGHVLGAAMFMVEIAGVRVLYTGDFSRQPDRHLLGAETPTMSPDVLIVESTYGIQVHE
SQSEREKRFTQMVTEIVKRGGRCLIPVFALGRAQELLLILDEFWETHQDLQHIPIYYASS
LAKKCMTIFQTYINMMNDKIRKQFDIHNPFVFKHISNLRSIEDFQDNGPCVIMASPGMLQ
SGLSKELFELWCQDAKNGVIIAGYSVDGTLAKKIMSEPETVTLSNGNTVPLRMSVRTISF
SAHSDKAQTEEFIGTIKPPHIILVHGDLANCNRLKHSLQSKFTDSKVYAPKNCTSINIMF
QGEKRAKVLGQLAVTKYEDGDEINGILLHHNFQHLLLNEKDLKLYSDVCCSGVKQTLLVP
LNDTVPYEQLIRSVFSNVTLETEPTEVQVKSEIMDTTDDKKEDIKYTPIEFAAEAAKPIV
IFIDGVVRIELRLQEKTPCGVIEWPSSAANDTIVDSICNLILYTDKSFHESLLDEGKDEL
KMLYCIQQMLKEHFGECTCRLSENREIDVVDKEDKVIVKVSSMGEIIECVEERNRGFLEI
VIRRIFMSMFPLPTMMGCLDDCDHGHSHH
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaacactccttcatcaaatcctccaccatcatcgtcatcggcaacaccacaa
cctgttaccatcacaaaaaacacacctcacacacaatatatttacggagaaaaattagtt
gtaactccattaggagcaggaaatgaagtcggaagaagtgcagtccttctacaattcaag
ggaaagactgttctttttgattgtggtattcaccctgcattcactggtatggctagtctt
cctttctttgatacgatagaacctagtgaaattgatttagttttagtaacacattttcat
ttggatcactgcggagcacttccttactttactgaacatacaaatttccaaggaagagta
ttcatgactcaccctactaaagctatctataaattattgttgactgactttgttaaagtg
agtgatgttcatgtagatgatcaacttttcacagaacaaaatttacttgattcactgaag
aaaattgaacttattgattatcatcaagaattggaacataatggaattaaattttggtgt
tataatgctggacacgtattaggagcagccatgtttatggtagaaattgcaggtgtaaga
gttttatatacaggagacttttctaggcaaccagatagacatttactaggagctgaaaca
ccaacaatgtcacctgatgttcttattgtagaatctacttatggtattcaagtacatgaa
agtcaatctgaaagagaaaaacgttttacacaaatggttactgaaattgttaagagagga
ggtcgttgtcttatacccgtatttgctttgggaagagcacaagagcttcttctcattcta
gatgaattttgggaaacacatcaagatttacaacatattcctatttattatgcttcttcc
cttgctaagaaatgtatgaccattttccaaacttatattaacatgatgaatgacaagatt
agaaaacaatttgatattcacaatcctttcgtttttaagcatatcagtaatttgagatct
attgaagacttccaagataatggtccttgtgtcattatggccagtcctggtatgcttcaa
tctggtttgtcaaaggaattgtttgaattgtggtgtcaagatgccaagaatggtgttatc
attgctggttattcagttgatggtacacttgctaagaaaattatgagtgaacctgaaact
gttacactttcaaatggtaatacagttccattgagaatgagtgtgagaactatttcattc
tctgctcactctgataaggcacaaacagaggaatttattggaactatcaaacctcctcac
attattttagtacacggagatcttgctaattgcaatcgtttgaagcattcacttcaaagc
aagtttacagacagcaaggtttatgcaccaaagaattgtacaagcattaatattatgttc
caaggtgaaaagagagccaaggttttaggtcaacttgcagttacaaaatatgaagatggt
gacgaaattaatggtattcttttgcatcacaatttccaacatttacttttgaacgaaaag
gatcttaaattgtactctgatgtttgttgctctggtgttaagcaaacactccttgtacca
ttgaatgatacagtaccatatgaacaattaattagatcagtatttagcaatgtaactttg
gaaaccgaacctaccgaagttcaagttaaatcagaaattatggacacaacagatgacaag
aaggaagacatcaaatatactccaatagagtttgctgcagaagctgccaaacctattgtc
attttcattgatggtgttgtcagaattgaattgagattacaagaaaagacaccatgtggt
gtcattgaatggccaagtagtgcagcaaatgacactattgttgatagtatctgtaattta
atcttatatactgacaaatctttccatgaaagtttactcgatgaaggaaaggatgaattg
aaaatgttatattgcattcaacaaatgcttaaagaacattttggagaatgcacatgtaga
ctctcagaaaatagagaaattgatgttgtagataaggaagataaggtcattgtaaaggtc
tctagcatgggtgaaattatcgaatgtgttgaggaaagaaatcgaggatttttggaaatt
gtcattcgaagaattttcatgtcaatgttcccacttccaaccatgatgggttgtttggat
gattgtgatcatggtcactctcaccattaa
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integrated database retrieval system
