Naegleria gruberi: NAEGRDRAFT_73050
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Entry
NAEGRDRAFT_73050 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_73050
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_73050
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
NAEGRDRAFT_73050
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
NAEGRDRAFT_73050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT
HEAT_2
HEAT_GCN1
HEAT_MROH2B_C
Vac14_Fab1_bd
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
8854020
NCBI-ProteinID:
XP_002671795
JGI:
Naegr1_73050
UniProt:
D2VVK4
LinkDB
All DBs
AA seq
1736 aa
AA seq
DB search
MPPRTSKKKASSSKEAPQTPKRKSRNDEEATFTPMGTPSQSLSQSLFSLSTSQAQLSQYL
DEGEEVSDVLSGAYISEGMTEGDLSERMKKISDILKGMGQLATPDDAPWDELFISNIIEK
KIISNKTEEVRVYAACSIVDILRVTAPDCPFEDEELPRVFKFIIEQIEALSRGGVLFSKR
FYLLERLSTVKIFIMLVNIDEGEGLIIPLFQSLFRIVTDSESTQPQKVISYICDIMITLI
ESIETVDSKLIEVLIQPLLENRSKIPSEDDEDEDKDEDDDEDSHFSAKYISKNVLDKTQE
HLSNQLNDYLNDILKELDVTKDKTKSTYKKKRARVFSLIYEINLISSRLLLTVIPNLCIQ
LKDEEVQVRSAVIQLLGNMFKAKESELFKEYPNIFETDFLSRFTDKDNRVRIYMSKFASG
MIKNHPSSNKVLNERLEERIMDPDEKVRRNVVETIINIAMESPALVSDSLMQKLKERTRD
KKAVLRLHALELCAKLYNHHATEALKIGDSWENTTSEKLAWIPNTIIKLYAEQHEQVVSN
RLMVEKLIDQELLAQDSSRTKTLLDLYTKLDQSSKHVLSAIISQKKSLQHFVNTLIHLEE
DDDSRLPLILNNLSSSLPDESVGKRVWKDVFNRRNKQNDNAITTLKSCLNTNITFDAVTK
LKKKGEEKILGEKKEEKDYMKTVIQKLAMTIFTKEQAKELVKLAHSFSDTKQIEMTKSSI
RLFNIIVQAYPAMGKDSIPSLIELFEKEQDYDLNILVLKALSQCVVELEKTNFSLANELE
TKVVDFCTMGKPKEVKRAAEVITKAFTHPKSIFSQIIKEAKSKMNYGEELLTSISAFRQV
AIHDIELFRRDEEEIVEFILNEVILVDREEMSSSWETLSVDTQTKVQGFKFLVDYCIACT
KEGITEESEATSSKLVNILFSILKNKGSISRVIQEINDEMETSEEQEEDDKKESKKREID
RAALRLIAANSIIKLTTSDFKLNVSMERFLQLAFVFLDTSVEVKRKFVEKLFSELMSTRL
STRFTALLILFVGDKNAELAVRAKSHFSKVVTFFRALISKTKGITLTSPKANDLFPEYIL
PYLVFLLSHHPQFKDEAPQFMTFQKILYAYFDEVTHDTDNLSFFHHLITKLKQRKDSLAL
ESTNHLIICDMSVSIVNRCAESSGSSTSSVPFPGKVFIPPYFVVDKENESNLETIKTLFL
PDGFKLNEKLARQVQPVEKKKKPTKVDEKKDKKRKRTTTKKTTKKKKEEKESTKRSLPSR
SAKTNRKKIESEDESEEEEEEEEEEQSEGEEQSEQSEEEEEEEEEKIPPRTSKQKKEPKE
SSPQTTVPTASTSRPSAEEQEHFYSSDDFGDEVDLKKVKFSENTNLKDSKTPEKLIEESE
TDDEKYIQQLSEKMNELCAMMRTEVMNNLFDLKKRNVQRLTDFNQRSNEDRDDLILQQRL
KEEKLRDSIAKRDYYLARFKTLTFRMADQISQARKVEREKTLVRNILSKWKEHSQEKKRK
KNLGEMLLKTYKRNQARKILQGWYMWILNSKQNTTERIWQNRLENEKAELRNDYEMKIEH
LKEEILKLNQALEREQNDKQVLQENLKKALMRGVCAMNNKFLEIIKDTNTKPTQSFNVQQ
ELEDALNEVQSESEFIQNIANQQTQIPRPYPSYPEPTFYSVPQPQPLPTSSQPTRFITAP
MEATQVKNPQPQVRVIRETVNYPLKQTLQSPLHPPKKDRNSPPNTKQKPTNPSNKR
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaagaacaagtaaaaaaaaggcatcttcatcaaaagaagcaccacaaacacca
aagagaaagtcaagaaatgatgaagaggctactttcacaccaatgggtacaccaagtcaa
tcactctcacaatcattatttagtttatcaacaagtcaagctcaattgtctcaatatctt
gatgaaggagaagaagtttctgatgttttatctggagcttatatttcggaaggtatgacc
gaaggagatttatctgaaagaatgaagaaaatatctgatatcttgaaaggaatgggacag
ttagcaacacctgatgatgctccttgggatgagcttttcatatctaacataattgaaaag
aaaatcatttcaaataagactgaagaagttagagtttatgcagcttgttcaattgttgat
attttgagagttactgctcctgattgtccatttgaagatgaagaattaccaagagtattt
aaatttattatcgaacaaattgaagctctcagtagaggtggtgtactcttttctaagaga
ttctatttattggaaagactttcaacagttaaaatatttattatgcttgtaaacattgat
gaaggagaaggtttaattattccactctttcaatcattgtttagaattgtaactgatagt
gaatctacccaaccacaaaaagtcatatcatacatttgtgatattatgataactcttatt
gaatcaattgaaactgttgattctaagcttattgaagttcttattcaacctttattggaa
aatagatctaaaattccatcagaagatgatgaagatgaagacaaggatgaagatgatgat
gaagattcacatttctcagccaaatacatttccaagaatgttttagataagactcaagaa
catttatcaaatcaactcaacgactacctcaatgacattcttaaagagcttgatgtaaca
aaagacaaaacaaaatctacatacaagaagaaacgtgctagagtattcagcttgatttat
gaaatcaacttgatttcttcaagacttttattgactgttattccaaacctttgtattcaa
ttgaaggatgaggaagttcaagttagatcagctgtaattcaattattgggaaatatgttc
aaagcaaaggaatcagaactatttaaggaatatccaaacatctttgaaacagatttcctt
tctagatttactgataaggataaccgtgttagaatttatatgagtaaatttgcgagtgga
atgattaaaaatcacccatccagtaacaaggtactaaatgaaagactggaggaaagaatt
atggaccctgatgaaaaagtaagaagaaatgttgttgaaactattatcaatattgccatg
gagagtcctgctcttgtatctgatagtttaatgcaaaaacttaaggaaagaacaagagac
aaaaaggctgttcttagacttcatgctttggagttatgtgccaagctctataaccaccat
gctactgaagcattaaaaattggagatagttgggaaaatactacaagtgaaaagcttgca
tggattccaaatactattatcaagttgtatgctgaacaacatgaacaggttgtttcgaat
agattaatggtagaaaaacttattgaccaagaattattggcacaagactcttcaagaacc
aagaccctcttggatttgtacacaaaacttgatcaatcatcaaagcatgtcttatcagca
ataatttcacaaaagaagtctttacaacactttgtcaacactcttattcatttggaagaa
gatgatgattcaagattaccacttattttgaataacctttcctcttctcttcctgatgaa
tcagttggtaaaagagtttggaaagatgtctttaatcgtagaaacaaacaaaacgataat
gctatcacaaccttaaagtcttgcttgaataccaatatcacttttgatgctgtaactaaa
cttaagaagaaaggtgaagagaagattcttggagaaaagaaggaagaaaaggactacatg
aagactgtaatccaaaaacttgccatgaccatttttacaaaggaacaagctaaggaatta
gttaaacttgctcactcattctctgatactaaacaaattgaaatgacaaaatcatcaatt
cgtctcttcaatataatagtacaagcttacccagcaatgggaaaggattccattccttca
ttgattgaattattcgagaaggagcaagattatgatcttaatattctagtccttaaggca
ttatctcaatgcgttgtagagttggaaaaaaccaacttctctcttgctaatgaacttgag
acaaaagttgtcgatttctgtactatgggcaaaccaaaggaagttaagagagctgcagaa
gtaattaccaaggctttcacacatccaaagtctatcttttcacaaattatcaaagaggcc
aagtctaagatgaactatggtgaagaacttttaacatctattagtgctttcagacaagtt
gcaattcatgatattgaattattcagacgtgatgaagaagaaattgtcgaatttattttg
aatgaagttattttggttgatagagaagaaatgagctcctcttgggaaactttatctgta
gatacacaaaccaaggttcaaggattcaagtttttggttgactattgcattgcttgtact
aaggaaggcattactgaagagtcagaagcaactagttcaaaacttgtaaacattctcttc
agtattctcaagaataagggttctatttctcgtgtcatccaagaaatcaatgatgaaatg
gaaaccagtgaagaacaagaagaagatgataagaaggagagtaagaagagagaaattgat
agggcagctcttagactgatagctgccaactctattattaagcttactacttctgatttc
aagttgaatgtttcaatggaaagattcctacaattggcttttgtatttcttgatacttca
gtggaagttaaacgcaagtttgttgaaaaattgttctccgaattaatgagtaccagactt
tcaactagatttactgctcttttaattctctttgttggtgataagaatgctgaacttgct
gtaagagctaaatcccatttttcaaaggttgtaaccttttttagagctctcatttctaaa
acaaaaggaatcacactcacatcacctaaagctaatgacttattcccagaatatattttg
ccataccttgtattcttactttcccatcatcctcaattcaaagacgaagcaccccaattc
atgacattccaaaagattttatatgcttatttcgatgaagttactcacgatactgataat
ttatcattcttccaccacctcattactaaattgaaacaaagaaaggattctctcgctttg
gagtcaaccaatcacctcataatttgtgatatgtcagtctcaattgtaaatagatgcgct
gaaagctctggatcatcaacttcatctgttccattccctggtaaagtattcatccctcca
tactttgttgttgataaggaaaatgaatcaaacttggagactatcaagactttattctta
ccagatggttttaaattgaacgaaaagcttgccagacaagttcaaccagttgaaaagaag
aaaaaacccacaaaagtagacgaaaagaaggacaagaagagaaaacgtaccacaacaaag
aagacaacaaagaagaagaaggaagaaaaagaatctacaaagagatctttgccaagtaga
tctgcaaagacaaatagaaagaaaattgaaagcgaagacgaaagtgaggaagaagaggag
gaagaggaagaagaacaaagcgaaggagaagaacaaagtgaacaaagtgaagaagaggag
gaggaagaagaagaaaagatacctcctagaacctcaaaacagaagaaagaaccaaaggaa
agctcgcctcaaacaactgtacctactgcatcaacaagtagaccatctgcagaagagcag
gagcatttctattcttcagacgattttggggatgaagttgacttgaagaaggttaaattc
tcggaaaatacaaaccttaaggattcaaaaacaccagaaaaattaattgaagaatccgag
accgatgacgaaaagtatatacaacaattgtctgaaaagatgaatgaactctgtgcaatg
atgagaacagaagtcatgaataacctctttgatttgaagaagagaaatgtgcaaagactc
actgatttcaatcaaagaagcaatgaagacagagatgatctgattctccaacaacgttta
aaagaggaaaaactaagagacagcattgccaaacgtgattattatttagcgagatttaaa
actctcactttccgaatggctgatcaaatttcacaagctagaaaggtggaaagagaaaag
acccttgtgagaaacattttaagcaaatggaaagaacactctcaagaaaagaaacgaaag
aaaaacctaggagaaatgttacttaaaacctataagagaaatcaagcaagaaaaatcctt
caaggatggtatatgtggattttaaactctaagcaaaacacaacagaacgaatttggcaa
aacagacttgaaaatgaaaaagccgaactgagaaatgattatgaaatgaaaattgagcat
ttgaaggaagaaattcttaaactgaatcaagctctagaaagagaacaaaatgataagcaa
gttcttcaagaaaacttaaagaaggcactcatgagaggcgtgtgcgcaatgaataacaaa
tttttggaaattatcaaggatacaaataccaaaccaactcaatctttcaatgttcaacaa
gaacttgaagatgctttgaacgaggtacaaagtgaatccgagtttattcaaaatattgca
aatcaacaaactcaaattccaagaccttaccctagttatcctgaaccaacattctacagt
gtcccacaacctcaaccattaccaactagttcacaaccaacacgatttataacagcccca
atggaagctacacaggtgaaaaaccctcaaccacaagtaagagtaatcagagaaactgta
aattatccacttaaacaaactttgcaatcacccttgcatccacctaagaaagacagaaat
agtcctccaaatactaaacaaaaaccaaccaatccatcaaataaacgataa
DBGET
integrated database retrieval system